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13_1_40cm_scaffold_7129_9

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: 8152..8877

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 190.0
  • Bit_score: 265
  • Evalue 7.20e-68
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 184.0
  • Bit_score: 126
  • Evalue 2.80e-26
putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 188.0
  • Bit_score: 124
  • Evalue 5.20e-26

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGCGGGACGTCAGAGACCAGGACTTATTAAAACGCTTACAGGCAGGCGACGAGCGAGCGATCGCCGAACTGGCGGATACCTACGGGACTAAAATCTATCAGCTCGCATTTCGATATCTCCGCAACAAGGAAGACGCCGAAGAGGTCGTACAAGACGTGCTGCTGAAGGTCCACCGCAAGGTGGACGCGTTTCGCGGCGACGCGGCGCTGTCGTCGTGGATCTATCGCATCACGTTCAATGCGGCGATGTCGCGGCTGCGGACCGCGCGCTATCAGCGATCGCAGGACGAGGCACGGCAGGCGGAAGCTGGCGGTGACAAGAATCCGGCGCTCGCGCGCCCCGACGTGGCGGACTGGAGCAACATGGCGGACGAGCAGGTGCTGCGCTCGCAGCTCCGCCGCCGCGTGCTGCGCGCGATTCTCGCGCTGCCGGCGATTTATCGCGCGCCAGTCGTGCTTCGTGATCTTCACGGGATGTCGACCGAAGAAGCGAGCGCGATGCTGAAGGTGAAGGATCAGACGCTGAAGTCGCGGCTGCACCGACGGCACATAGGGCTGGATAGGCGGGATGGGCTGCCGTCCTGCCTATTCCACCCGCAAAGCCACCGCGGGATCGATCCGCATGGCGCGTCGCGTCGGCAGCCAGCAGGCCAGGAACGCCACCACAATCAGCAGTCCGCTCACCGCGGCGACGCTCAACGGGTCGTGCGGGCTCGTCTCGAATAG
PROTEIN sequence
Length: 242
MRDVRDQDLLKRLQAGDERAIAELADTYGTKIYQLAFRYLRNKEDAEEVVQDVLLKVHRKVDAFRGDAALSSWIYRITFNAAMSRLRTARYQRSQDEARQAEAGGDKNPALARPDVADWSNMADEQVLRSQLRRRVLRAILALPAIYRAPVVLRDLHGMSTEEASAMLKVKDQTLKSRLHRRHIGLDRRDGLPSCLFHPQSHRGIDPHGASRRQPAGQERHHNQQSAHRGDAQRVVRARLE*