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13_1_20cm_3_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 165 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_0_1
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2..1729
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002D2FD3F
Sensor histidine kinase {ECO:0000313|EMBL:EKE98725.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
PAS domain S-box
13_1_20cm_3_scaffold_0_2
unknown

Not on your lists

2065..2436
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_3_scaffold_0_3
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2423..2860
DNA (438bp) protein (146aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; B
Histidine kinase,PAS domain-containing protein,histidine kinase n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IMC3_9BURK
13_1_20cm_3_scaffold_0_4
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

Not on your lists

3046..3504
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Helobdella robusta RepID=T1F245_HELRO
Uncharacterized protein {ECO:0000313|EMBL:ESO07880.1, ECO:0000313|EnsemblMetazoa:HelroP169578}; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhy
13_1_20cm_3_scaffold_0_5
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

3645..4730
DNA (1086bp) protein (362aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQI4_ROSCS
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ABU59830.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseifle
Rieske (2Fe-2S) domain-containing protein
13_1_20cm_3_scaffold_0_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(4781..5017)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIB2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBE67262.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein
13_1_20cm_3_scaffold_0_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(5023..5256)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIB1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBE67261.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein
13_1_20cm_3_scaffold_0_8
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5398..5613)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JDX0_NITOC
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
hypothetical protein
13_1_20cm_3_scaffold_0_9
unknown

Not on your lists

5731..5988
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_3_scaffold_0_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5899..7149)
DNA (1251bp) protein (417aa)
Peptidase M20 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021Q4_SOLUE
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:CDM66310.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.
peptidase M20
13_1_20cm_3_scaffold_0_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7367..10981)
DNA (3615bp) protein (1205aa)
ppkA; serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QL28_9CYAN
DNA-binding protein with winged-HTH domain {ECO:0000313|EMBL:CDM65757.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatog
13_1_20cm_3_scaffold_0_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11564..12226)
DNA (663bp) protein (221aa)
Membrane protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UU0_SOLUE
Membrane protein {ECO:0000313|EMBL:ABJ86580.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (stra
hypothetical protein
13_1_20cm_3_scaffold_0_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12430..12993)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5B0_NITMU
Uncharacterized protein {ECO:0000313|EMBL:ABB76061.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
hypothetical protein
13_1_20cm_3_scaffold_0_14
unknown

Not on your lists

comp(13044..13271)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_20cm_3_scaffold_0_15
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

comp(13439..15472)
DNA (2034bp) protein (678aa)
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SJG4_9BACT rbh
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:BAL56300.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
13_1_20cm_3_scaffold_0_16
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(15518..16081)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NK87_ROSCS
Uncharacterized protein {ECO:0000313|EMBL:ABU57907.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" sour
hypothetical protein
13_1_20cm_3_scaffold_0_17
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(16078..16332)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWH5_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:ABQ90978.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp.
hypothetical protein
13_1_20cm_3_scaffold_0_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16329..17363)
DNA (1035bp) protein (345aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFX0_SINAD rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGA27750.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisph
methylase
13_1_20cm_3_scaffold_0_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

17604..17846
DNA (243bp) protein (81aa)
Carboxymuconolactone decarboxylase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6L7_9CHLR
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EFH80628.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonob
13_1_20cm_3_scaffold_0_20
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

17865..18143
DNA (279bp) protein (93aa)
Carboxymuconolactone decarboxylase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6L7_9CHLR
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EFH80628.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonob
alkylhydroperoxidase-like protein, AhpD family
13_1_20cm_3_scaffold_0_21
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

18253..19263
DNA (1011bp) protein (337aa)
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
hypothetical protein id=24453423 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_1_20cm_3_scaffold_0_22
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

19276..19596
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82WP2_NITEU
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_1_20cm_3_scaffold_0_23
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(19686..19961)
DNA (276bp) protein (92aa)
Uncharacterized protein n=10 Tax=Microcystis aeruginosa RepID=I4G122_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI01633.1}; TaxID=1160281 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9443.;"
hypothetical protein
13_1_20cm_3_scaffold_0_24
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(19909..20202)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002D53F38
Uncharacterized protein {ECO:0000313|EMBL:ELS02776.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
hypothetical protein
13_1_20cm_3_scaffold_0_25
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(20280..21911)
DNA (1632bp) protein (544aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFS7_9EURY
ATP-dependent DNA ligase
13_1_20cm_3_scaffold_0_26
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

22085..22660
DNA (576bp) protein (192aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNJ8_9BACT
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:EEF58538.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphae
uracil DNA glycosylase superfamily protein
13_1_20cm_3_scaffold_0_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22921..24498
DNA (1578bp) protein (526aa)
DNA polymerase LigD, polymerase domain {ECO:0000313|EMBL:CDM65510.1}; EC=6.5.1.1 {ECO:0000313|EMBL:CDM65510.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas
ATP-dependent DNA ligase n=3 Tax=Amycolatopsis mediterranei RepID=D8HR62_AMYMU
lig; ATP-dependent DNA ligase
13_1_20cm_3_scaffold_0_28
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24543..24743
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VU21_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAO39849.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hypothetical protein
13_1_20cm_3_scaffold_0_29
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24819..25091
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D6Q9_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU73245.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
hypothetical protein
13_1_20cm_3_scaffold_0_30
unknown

Not on your lists

25242..25385
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying items 1-30 of 165 in total

View Taxonomy