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13_1_20cm_3_scaffold_188

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_188_1
Clostridium sp. CAG:302, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..108)
DNA (108bp) protein (36aa)
Elongation factor Tu n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCG1_NAKMY
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262793 species="Bacteria; Firmicutes; Clostridia; Clostrid
translation elongation factor Tu
13_1_20cm_3_scaffold_188_trna_5
unknown

Not on your lists

comp(157..228)
DNA (72bp)
transferRNA
13_1_20cm_3_scaffold_188_2
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(208..576)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EMD4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85847.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_20cm_3_scaffold_188_trna_4
unknown

Not on your lists

comp(623..695)
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_188_trna_3
unknown

Not on your lists

comp(784..868)
DNA (85bp)
transferRNA
13_1_20cm_3_scaffold_188_3
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1185..3620)
DNA (2436bp) protein (812aa)
WD40-like Beta Propeller n=1 Tax=Bacillus cereus R309803 RepID=C2Q875_BACCE
WD40-like Beta Propeller {ECO:0000313|EMBL:EEK80289.1}; TaxID=526968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus R309803
WD40-like beta Propeller containing protein
13_1_20cm_3_scaffold_188_4
unknown

Not on your lists

comp(3985..4221)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_3_scaffold_188_5
unknown

Not on your lists

4317..4454
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_3_scaffold_188_trna_2
unknown

Not on your lists

comp(4597..4668)
DNA (72bp)
transferRNA
13_1_20cm_3_scaffold_188_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4983..5999
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFA0_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM66237.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_188_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6210..7376
DNA (1167bp) protein (389aa)
Fimbrial protein pilin n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMB1_KORVE
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CDM65570.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source
hypothetical protein
13_1_20cm_3_scaffold_188_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7458..8201)
DNA (744bp) protein (248aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CDM66236.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CDM66236.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteri
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF03_CHLTF
13_1_20cm_3_scaffold_188_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8349..11369
DNA (3021bp) protein (1007aa)
UvrABC system protein A n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCJ2_9BACT rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit A
13_1_20cm_3_scaffold_188_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

11408..11602
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4I0_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
13_1_20cm_3_scaffold_188_11
unknown

Not on your lists

comp(11616..11876)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_20cm_3_scaffold_188_12
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

11926..12138
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=RBG_13_Planctomycetes_60_9_curated
Uncharacterized protein id=4213588 bin=GWC2_Planctomycetes_45_44 species=Pseudanabaena biceps genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
13_1_20cm_3_scaffold_188_13
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12286..13389
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C7Z1_9PLAN rbh
Uncharacterized protein {ECO:0000313|EMBL:EDL59264.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
13_1_20cm_3_scaffold_188_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13456..14103)
DNA (648bp) protein (216aa)
Uncharacterized protein n=7 Tax=Bacteria RepID=H0P599_9SYNC
Uncharacterized protein {ECO:0000313|EMBL:CDM64459.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
slr2084; hypothetical protein
13_1_20cm_3_scaffold_188_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14190..14804
DNA (615bp) protein (205aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isom
Phosphoheptose isomerase id=4157139 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
phosphoheptose isomerase
13_1_20cm_3_scaffold_188_16
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

14813..15799
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDN1_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:AEP12889.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
hypothetical protein
13_1_20cm_3_scaffold_188_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15919..16812)
DNA (894bp) protein (298aa)
Phosphoesterase, PA-phosphatase related n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025P4_SOLUE
Phosphoesterase, PA-phosphatase related {ECO:0000313|EMBL:ABJ83275.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solib
PA-phosphatase-like phosphoesterase
13_1_20cm_3_scaffold_188_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17041..19503)
DNA (2463bp) protein (821aa)
Putative TonB-dependent receptor n=1 Tax=mine drainage metagenome RepID=E6QHP4_9ZZZZ
Outer membrane receptor protein {ECO:0000313|EMBL:CDM64841.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB-dependent receptor
13_1_20cm_3_scaffold_188_19
unknown

Not on your lists

comp(20216..20521)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_3_scaffold_188_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(20535..22142)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBZ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK40756.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_3_scaffold_188_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22703..23074
DNA (372bp) protein (124aa)
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:CDM65336.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphato
transcriptional regulators, TraR/DksA family id=24604420 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_1_20cm_3_scaffold_188_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

23514..25580
DNA (2067bp) protein (689aa)
thimet oligopeptidase (EC:3.4.24.15); K01392 thimet oligopeptidase [EC:3.4.24.15] Tax=RBG_16_RIF_WS3X_71_46_curated
thimet oligopeptidase (EC:3.4.24.15); K01392 thimet oligopeptidase [EC:3.4.24.15] id=24502008 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
peptidase, m3 (thimet oligopeptidase) family
13_1_20cm_3_scaffold_188_23
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(25646..25948)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000349AEC0
Putative uncharacterized protein {ECO:0000313|EMBL:CBN55314.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506
hypothetical protein
13_1_20cm_3_scaffold_188_24
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(25967..26179)
DNA (213bp) protein (71aa)
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein id=14626224 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_3_scaffold_188_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(26227..27150)
DNA (924bp) protein (308aa)
Tyrosine recombinase XerC n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPQ9_9BACT rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
site-specific recombinase XerD
13_1_20cm_3_scaffold_188_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(27275..28324)
DNA (1050bp) protein (350aa)
von Willebrand factor type A n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR0_9BACT
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:CDM66095.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Mg-chelatase subunit ChlD
Displaying items 1-30 of 44 in total

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