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13_1_20cm_3_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_250_1
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1..183
DNA (183bp) protein (61aa)
Transport system permease protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YT22_MELRP
Transport system permease protein {ECO:0000313|EMBL:AFN73697.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melio
transport system permease protein
13_1_20cm_3_scaffold_250_2
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195..992
DNA (798bp) protein (266aa)
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-)
iron ABC transporter ATP-binding protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AD07
Uncharacterized protein {ECO:0000313|EMBL:KIE17820.1}; TaxID=1487949 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K
13_1_20cm_3_scaffold_250_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1332..3728
DNA (2397bp) protein (799aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEE3_CHLTF rbh
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:CDM66104.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas
ferrienterochelin and colicins outer membrane receptor
13_1_20cm_3_scaffold_250_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3855..4265)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7YTQ6_BDEBC
Uncharacterized protein {ECO:0000313|EMBL:CDM66296.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_250_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4525..5658
DNA (1134bp) protein (378aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66295.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_250_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5752..7227
DNA (1476bp) protein (492aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG32_CHLTF
13_1_20cm_3_scaffold_250_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7329..8048
DNA (720bp) protein (240aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023X9_SOLUE id=5223348 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Uncharacterized protein {ECO:0000313|EMBL:CDM66293.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
short-chain dehydrogenase/reductase SDR
13_1_20cm_3_scaffold_250_8
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8075..9121
DNA (1047bp) protein (349aa)
SHNi-TPR family protein (Fragment) n=1 Tax=Lyngbya aestuarii BL J RepID=U7QJ01_9CYAN
SHNi-TPR family protein {ECO:0000313|EMBL:ERT06381.1}; Flags: Fragment;; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL
hypothetical protein
13_1_20cm_3_scaffold_250_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9345..9794
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=454194 species="Bacter
D-tyrosyl-tRNA(Tyr) deacylase n=6 Tax=Clostridium thermocellum RepID=DTD_CLOTH
D-tyrosyl-tRNA(Tyr) deacylase
13_1_20cm_3_scaffold_250_10
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

9831..10574
DNA (744bp) protein (248aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:AEP11836.1}; EC=5.2.1.8 {ECO:0000313|EMBL:AEP11836.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria
cyclophilin type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH94_CHLTF
13_1_20cm_3_scaffold_250_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10667..11065)
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65702.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein id=12555994 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_20cm_3_scaffold_250_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11388..14291
DNA (2904bp) protein (968aa)
Aconitase {ECO:0000313|EMBL:CDM65701.1}; EC=4.2.1.3 {ECO:0000313|EMBL:CDM65701.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methy
Aconitate hydratase 1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMS0_9BACT rbh
aconitate hydratase 1
13_1_20cm_3_scaffold_250_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14543..16051
DNA (1509bp) protein (503aa)
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:CDM65952.1}; EC=1.2.1.39 {ECO:0000313|EMBL:CDM65952.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.
Aldehyde dehydrogenase n=1 Tax=Geobacillus thermoglucosidans TNO-09.020 RepID=I0U9Q4_GEOTM rbh
aldehyde dehydrogenase
13_1_20cm_3_scaffold_250_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16387..16740
DNA (354bp) protein (118aa)
Nucleic acid binding, OB-fold, tRNA/helicase-type n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RV1_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:CDM65953.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
nucleic acid binding, OB-fold, tRNA/helicase-type
13_1_20cm_3_scaffold_250_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16740..17246
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEP2_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM65954.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_250_16
unknown

Not on your lists

17407..17967
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_20cm_3_scaffold_250_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

18021..19151
DNA (1131bp) protein (377aa)
Uncharacterized conserved protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEH9_CHLTF
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_3_scaffold_250_18
unknown

Not on your lists

comp(19152..19340)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_3_scaffold_250_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(19486..22557)
DNA (3072bp) protein (1024aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=uncultured bacterium RepID=K1YQU3_9BACT rbh
putative PAS/PAC sensor protein Tax=RBG_16_Acidobacteria_70_10_curated
putative PAS/PAC sensor protein
13_1_20cm_3_scaffold_250_20
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22564..22839)
DNA (276bp) protein (92aa)
Response regulator receiver n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VRG9_DESAO
Response regulator receiver {ECO:0000313|EMBL:ADU63006.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulf
response regulator receiver
13_1_20cm_3_scaffold_250_21
unknown

Not on your lists

23848..24150
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_20cm_3_scaffold_250_22
unknown

Not on your lists

24445..24921
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_20cm_3_scaffold_250_23
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(26069..26701)
DNA (633bp) protein (211aa)
Response regulator with a HTH DNA-binding domain n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRF9_SYNAS
response regulator Tax=RBG_13_Nitrospirae_43_8_curated
response regulator
13_1_20cm_3_scaffold_250_24
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27066..28541)
DNA (1476bp) protein (492aa)
Signal transduction histidine kinase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRG0_SYNAS
Signal transduction histidine kinase {ECO:0000313|EMBL:ABC76667.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntro
signal transduction histidine kinase
13_1_20cm_3_scaffold_250_25
RLO_PLX_64_10, Bacteria

Not on your lists

29418..31481
DNA (2064bp) protein (688aa)
Predicted ATPase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Adenylate/guanylate cyclase id=3293340 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
XRE family transcriptional regulator
13_1_20cm_3_scaffold_250_26
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

31420..31680
DNA (261bp) protein (87aa)
Transcriptional regulator, XRE family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7U0_SPHTD
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACZ37923.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerob
XRE family transcriptional regulator
13_1_20cm_3_scaffold_250_27
unknown

Not on your lists

31978..32133
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_20cm_3_scaffold_250_28
unknown

Not on your lists

32102..32446
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_20cm_3_scaffold_250_29
unknown

Not on your lists

32648..32851
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_3_scaffold_250_30
unknown

Not on your lists

33145..33756
DNA (612bp) protein (204aa)

This feature has no annotations

Displaying items 1-30 of 53 in total

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