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13_1_20cm_3_scaffold_291

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_291_1
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(2..637)
DNA (636bp) protein (212aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:AEP12938.1}; EC=2.7.11.1 {ECO:0000313|EMBL:AEP12938.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacteri
serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDT0_CHLTF
13_1_20cm_3_scaffold_291_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

817..1293
DNA (477bp) protein (159aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RISB_SYNFM
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
riboflavin synthase
13_1_20cm_3_scaffold_291_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1357..1851
DNA (495bp) protein (165aa)
N utilization substance protein B homolog n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD81_CHLTF
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=454194 species="Bacteria; Acido
transcription antitermination factor NusB
13_1_20cm_3_scaffold_291_4
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1985..3388
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incert
CheA signal transduction histidine kinase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIG1_THEM7
CheA signal transduction histidine kinase
13_1_20cm_3_scaffold_291_5
unknown

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3564..4208
DNA (645bp) protein (215aa)

This feature has no annotations

13_1_20cm_3_scaffold_291_6
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4327..4659)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J1N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS27941.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
13_1_20cm_3_scaffold_291_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4753..6150)
DNA (1398bp) protein (466aa)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:CDM65792.1}; EC=6.3.5.6 {ECO:0000313|EMBL:CDM65792.1};; EC=6.3.5.7 {ECO:0000313|EMBL:CDM65792.1};; TaxID=454194 species="B
Amidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C792_SPHTD id=5225656 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
amidase
13_1_20cm_3_scaffold_291_8
unknown

Not on your lists

comp(6170..6433)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_3_scaffold_291_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6513..6881)
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65795.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein id=24583293 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_20cm_3_scaffold_291_10

Not on your lists

comp(6961..7506)
DNA (546bp) protein (182aa)
phosphoglycerate mutase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B378C0
Marine sediment metagenome DNA, contig: S12H4_S00631 {ECO:0000313|EMBL:GAI82743.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
phosphoglycerate mutase
13_1_20cm_3_scaffold_291_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7846..11691
DNA (3846bp) protein (1282aa)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:CDM65796.1}; EC=1.2.4.2 {ECO:0000313|EMBL:CDM65796.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomo
kgd; alpha-ketoglutarate decarboxylase (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VQ8_SOLUE rbh
13_1_20cm_3_scaffold_291_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11982..12596
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DB688
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_3_scaffold_291_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

12589..12993
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E491F
transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
transcriptional regulator
13_1_20cm_3_scaffold_291_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13073..13771
DNA (699bp) protein (233aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88544.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_291_15
unknown

Not on your lists

13790..14143
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_3_scaffold_291_16
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14148..15860
DNA (1713bp) protein (571aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L49_SYMTH
Putative uncharacterized protein {ECO:0000313|EMBL:BAD41597.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium th
hypothetical protein
13_1_20cm_3_scaffold_291_17
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16034..17197
DNA (1164bp) protein (388aa)
Flavin-dependent dehydrogenase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PZY3_9FIRM rbh
Flavin-dependent dehydrogenase {ECO:0000313|EMBL:EKP94174.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" sourc
monooxygenase
13_1_20cm_3_scaffold_291_18
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17455..18432
DNA (978bp) protein (326aa)
Putative membrane protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HG84_GLUDA
Putative membrane protein {ECO:0000313|EMBL:CAP55461.1}; Uncharacterized protein {ECO:0000313|EMBL:ACI51971.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; A
hypothetical protein
13_1_20cm_3_scaffold_291_19
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

18538..19455
DNA (918bp) protein (306aa)
Tyrosine recombinase XerC n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEN6_CHLTF rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum
tyrosine recombinase XerD
13_1_20cm_3_scaffold_291_20
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

19619..20455
DNA (837bp) protein (279aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE86443.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
13_1_20cm_3_scaffold_291_21
unknown

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20707..20913
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 21 items

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