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13_1_20cm_3_scaffold_4010

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4010_1
unknown

Not on your lists

1..480
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_20cm_3_scaffold_4010_2
unknown

Not on your lists

1124..1591
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_20cm_3_scaffold_4010_3
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1663..2037
DNA (375bp) protein (125aa)
Helix-turn-helix domain protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SKU0_PLABD
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADY58760.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphae
hypothetical protein
13_1_20cm_3_scaffold_4010_4
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2048..2737
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI000368ECDE
Uncharacterized protein {ECO:0000313|EMBL:KEI68634.1}; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126
protein of unknown function DUF955
13_1_20cm_3_scaffold_4010_5
unknown

Not on your lists

3480..3677
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_3_scaffold_4010_6
GWC2_Planctomycete_KSU_39_26, GWC2_Planctomycete_KSU_39_26, GWC2_Planctomycete_KSU_39_26, GWC2_Planctomycete_KSU_39_26, Planctomycetes, Bacteria

Not on your lists

3878..4423
DNA (546bp) protein (182aa)
Uncharacterized protein id=2474387 bin=GWC2_Planctomycete_KSU_39_26 species=Rhodopirellula sallentina genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
13_1_20cm_3_scaffold_4010_7
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4482..5372
DNA (891bp) protein (297aa)
Uncharacterized protein {ECO:0000313|EMBL:EMI55229.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sa
Uncharacterized protein id=2474387 bin=GWC2_Planctomycete_KSU_39_26 species=Rhodopirellula sallentina genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
13_1_20cm_3_scaffold_4010_8
unknown

Not on your lists

5326..6051
DNA (726bp) protein (242aa)

This feature has no annotations

13_1_20cm_3_scaffold_4010_9
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6583..7032
DNA (450bp) protein (150aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5N0_ACIC5
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:ACO32940.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium cap
cyclic nucleotide-binding domain-containing protein
13_1_20cm_3_scaffold_4010_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(7364..8158)
DNA (795bp) protein (265aa)
Alpha/beta hydrolase fold protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6W2_9CHLR rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EFH80723.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonoba
hypothetical protein
13_1_20cm_3_scaffold_4010_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8158..8592)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI000381BE72
Uncharacterized protein {ECO:0000313|EMBL:ETK31126.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
MarR family transcriptional regulator
13_1_20cm_3_scaffold_4010_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(8834..9049)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXG6_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84899.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
13_1_20cm_3_scaffold_4010_13
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9390..11864)
DNA (2475bp) protein (825aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464X1_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB25346.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein
13_1_20cm_3_scaffold_4010_14
unknown

Not on your lists

12221..12769
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_20cm_3_scaffold_4010_15
unknown

Not on your lists

12797..13105
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_3_scaffold_4010_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13122..13325
DNA (204bp) protein (68aa)
DNA binding domain, excisionase family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMK9_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFB75794.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum
13_1_20cm_3_scaffold_4010_17
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13496..13663
DNA (168bp) protein (56aa)
hypothetical protein, partial n=1 Tax=Thioalkalivibrio sp. ALJ15 RepID=UPI00037BCA85
DNA primase {ECO:0000313|EMBL:CEG53040.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;"
Displaying 17 items

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