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13_1_20cm_3_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_41_1
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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1147..3363
DNA (2217bp) protein (739aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2U4_9BACT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AAP58620.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
transglutaminase
13_1_20cm_3_scaffold_41_2
unknown

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3360..3509
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_3_scaffold_41_3
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

3472..4824
DNA (1353bp) protein (451aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2U6_9BACT rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
30S ribosomal protein S12P methylthiotransferase rbh
13_1_20cm_3_scaffold_41_4
unknown

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4971..5150
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_3_scaffold_41_5

Not on your lists

5222..5836
DNA (615bp) protein (205aa)
phosphatidylglycerophosphatase A (EC:3.1.3.27)
Putative phosphatidyl-glycerophosphatase n=1 Tax=uncultured bacterium 253 RepID=E3T729_9BACT
Putative phosphatidyl-glycerophosphatase {ECO:0000313|EMBL:ADC36123.1}; TaxID=698385 species="Bacteria; environmental samples.;" source="uncultured bacterium 253.;"
13_1_20cm_3_scaffold_41_6
unknown

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6140..6364
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_20cm_3_scaffold_41_7
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

6688..8214
DNA (1527bp) protein (509aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
Putative D-3-phosphoglycerate dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2U9_9BACT rbh
Putative D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AAP58615.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
13_1_20cm_3_scaffold_41_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

8344..8658
DNA (315bp) protein (105aa)
Uncharacterized protein n=5 Tax=Crocosphaera watsonii RepID=G5IY65_CROWT
Uncharacterized protein Tax=RBG_16_Nitrospirae_64_22_curated
hypothetical protein
13_1_20cm_3_scaffold_41_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

8646..8891
DNA (246bp) protein (82aa)
hypothetical protein Tax=CSP1_2_Dadabacteria
hypothetical protein id=14424956 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_20cm_3_scaffold_41_10
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

8926..9153
DNA (228bp) protein (76aa)
hypothetical protein Tax=CG_Arma_01
Glr0386 protein id=1753052 bin=GWD2_Deltaproteobacteria_55_8 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_20cm_3_scaffold_41_11
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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9772..10776
DNA (1005bp) protein (335aa)
Conserved domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WCK6_BACOV
hypothetical protein Tax=RBG_13_Nitrospirae_39_12_curated
hypothetical protein
13_1_20cm_3_scaffold_41_12
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(10909..13083)
DNA (2175bp) protein (725aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLA2_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:AEP13377.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
hypothetical protein
13_1_20cm_3_scaffold_41_13
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(13133..14923)
DNA (1791bp) protein (597aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLA2_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:AEP13377.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
hypothetical protein
13_1_20cm_3_scaffold_41_14
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(14979..15308)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X310_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAP58554.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
13_1_20cm_3_scaffold_41_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15468..16544
DNA (1077bp) protein (359aa)
ABC transporter n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B62750
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:CDM65105.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomona
efflux ABC transporter ATP-binding protein
13_1_20cm_3_scaffold_41_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16541..17887
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003714487
ABC-type Na+ efflux pump, permease component {ECO:0000313|EMBL:CDM65106.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphat
hypothetical protein
13_1_20cm_3_scaffold_41_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17975..18523
DNA (549bp) protein (183aa)
Adenylyl cyclase CyaB, putative {ECO:0000313|EMBL:CDM65107.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CDM65107.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" sou
adenylate cyclase n=1 Tax=Desulfovibrio longus RepID=UPI0003B661D3
Adenylate cyclase
13_1_20cm_3_scaffold_41_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18598..19911)
DNA (1314bp) protein (438aa)
60 kDa chaperonin n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=CH60_KORVE
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=454194 speci
groEL; molecular chaperone GroEL
13_1_20cm_3_scaffold_41_19
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(19902..20192)
DNA (291bp) protein (97aa)
60 kDa chaperonin n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG60_CHLTF
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=981222 speci
chaperonin GroL
13_1_20cm_3_scaffold_41_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20265..20597)
DNA (333bp) protein (111aa)
10 kDa chaperonin n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG61_CHLTF
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=454194 speci
Co-chaperonin GroES (HSP10)
13_1_20cm_3_scaffold_41_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20931..21179)
DNA (249bp) protein (83aa)
Exodeoxyribonuclease VII small subunit {ECO:0000313|EMBL:CDM65111.1}; EC=3.1.11.6 {ECO:0000313|EMBL:CDM65111.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomona
hypothetical protein id=17289178 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_20cm_3_scaffold_41_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21346..22248)
DNA (903bp) protein (301aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=14627693 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
13_1_20cm_3_scaffold_41_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(22434..22913)
DNA (480bp) protein (160aa)
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein id=24462126 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_1_20cm_3_scaffold_41_24
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23345..24118
DNA (774bp) protein (258aa)
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=GWB2_Ignavibacteria_35_6b_curated
drrA; response regulator DrrA
drrA; response regulator DrrA id=24658433 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
13_1_20cm_3_scaffold_41_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

24289..26805
DNA (2517bp) protein (839aa)
Heat repeat-containing PBS lyase n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7JAM9_METBM
Uncharacterized protein {ECO:0000313|EMBL:CDM65115.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
heat repeat-containing PBS lyase
13_1_20cm_3_scaffold_41_26
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26888..30997
DNA (4110bp) protein (1370aa)
DnaJ domain-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U740_MYXSD rbh
DnaJ domain-containing protein {ECO:0000313|EMBL:AFE06724.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" sour
DnaJ domain-containing protein
13_1_20cm_3_scaffold_41_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

31082..33070
DNA (1989bp) protein (663aa)
UvrABC system protein B n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH67_CHLTF rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
13_1_20cm_3_scaffold_41_28
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

33316..33531
DNA (216bp) protein (72aa)
Uncharacterized protein n=5 Tax=Microcystis aeruginosa RepID=I4FEP9_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI39068.1}; TaxID=721123 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9701.;"
13_1_20cm_3_scaffold_41_29
R_OD1_Kaiserbacteria_52_12b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

33528..33704
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3MBS7_ANAVT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_52_12b_curated
hypothetical protein
13_1_20cm_3_scaffold_41_30
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

33746..35242
DNA (1497bp) protein (499aa)
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QX64_CHLT3
FAD-linked oxidase {ECO:0000313|EMBL:KER09596.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp.
D-lactate dehydrogenase
Displaying items 1-30 of 122 in total

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