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13_1_20cm_3_scaffold_443

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_443_1
unknown

Not on your lists

comp(3..119)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_20cm_3_scaffold_443_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(265..1419)
DNA (1155bp) protein (385aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:CDM65964.1}; EC=1.1.1.85 {ECO:0000313|EMBL:CDM65964.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
leuB3; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FME3_SORC5
13_1_20cm_3_scaffold_443_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1498..1938)
DNA (441bp) protein (147aa)
Universal stress protein UspA-like protein {ECO:0000313|EMBL:CDM65962.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatog
Putative Universal stress protein id=4877764 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
uspa domain-containing protein
13_1_20cm_3_scaffold_443_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2137..3252)
DNA (1116bp) protein (372aa)
Predicted aminopeptidase {ECO:0000313|EMBL:CDM65961.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative aminopeptidase id=12555374 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative aminopeptidase
13_1_20cm_3_scaffold_443_5
unknown

Not on your lists

comp(3416..3784)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_20cm_3_scaffold_443_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3787..4362)
DNA (576bp) protein (192aa)
Ferredoxin n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5F6_DESAT
Ferredoxin {ECO:0000313|EMBL:CDM65960.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_443_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4563..5051)
DNA (489bp) protein (163aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGQ7_CHLTF
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:CDM65959.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Fe2+/Zn2+ uptake regulation protein
13_1_20cm_3_scaffold_443_8
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5692..6129)
DNA (438bp) protein (146aa)
O-acetylhomoserine sulfhydrylase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SB61_9DELT
CoA-binding protein {ECO:0000313|EMBL:KFA89378.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystob
CoA-binding domain-containing protein
13_1_20cm_3_scaffold_443_9
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(6148..7383)
DNA (1236bp) protein (412aa)
group 1 glycosyl transferase; K13057 trehalose synthase [EC:2.4.1.245] Tax=RBG_13_Chloroflexi_54_9_curated
Glycosyl transferase group 1 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJV9_DESAR rbh
group 1 glycosyl transferase
13_1_20cm_3_scaffold_443_10
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

7779..8990
DNA (1212bp) protein (404aa)
ATPase {ECO:0000313|EMBL:KER10074.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
Biotin carboxylase id=3094895 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
biotin carboxylase
13_1_20cm_3_scaffold_443_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(9122..9601)
DNA (480bp) protein (160aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein id=24563970 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_1_20cm_3_scaffold_443_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9616..10578)
DNA (963bp) protein (321aa)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6Q1_GEOUR rbh
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:ABQ27469.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;"
alcohol dehydrogenase
13_1_20cm_3_scaffold_443_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10602..10949)
DNA (348bp) protein (116aa)
Thioredoxin n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDW7_CHLTF
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
thioredoxin
13_1_20cm_3_scaffold_443_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10999..11889)
DNA (891bp) protein (297aa)
2-alkenal reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJY8_9BACT
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:CDM64882.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas me
serine protease
Displaying 14 items

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