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13_1_20cm_3_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_48_1
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(1..2379)
DNA (2379bp) protein (793aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G4K6_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN57503.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506
outer membrane adhesin-like protein
13_1_20cm_3_scaffold_48_2
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2439..4193)
DNA (1755bp) protein (585aa)
Polymorphic membrane protein Chlamydia n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UB22_9CYAN
Polymorphic membrane protein Chlamydia {ECO:0000313|EMBL:EGK90388.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatu
polymorphic outer membrane protein
13_1_20cm_3_scaffold_48_3
unknown

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4631..4906
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_20cm_3_scaffold_48_4
unknown

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comp(4925..5488)
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_20cm_3_scaffold_48_5
unknown

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comp(5478..5675)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_3_scaffold_48_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5756..6319)
DNA (564bp) protein (188aa)
Disulphide bond corrector protein DsbC {ECO:0000313|EMBL:CDM66379.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes
hypothetical protein id=24505320 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
13_1_20cm_3_scaffold_48_7
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6598..7644)
DNA (1047bp) protein (349aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM13797.1}; TaxID=1321606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus selenatarsenatis SF-1.;"
putative transmembrane anti-sigma factor id=16898 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
13_1_20cm_3_scaffold_48_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7863..9206)
DNA (1344bp) protein (448aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFQ0_CHLTF
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:CDM66378.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source=
two component, sigma54 specific, Fis family transcriptional regulator
13_1_20cm_3_scaffold_48_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9336..10898)
DNA (1563bp) protein (521aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrin
Signal transduction histidine kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF5_CHLTF
signal transduction histidine kinase
13_1_20cm_3_scaffold_48_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11265..12968
DNA (1704bp) protein (568aa)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH80_CHLTF
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CDM66376.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas me
cell division protein FtsI/penicillin-binding protein 2
13_1_20cm_3_scaffold_48_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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13326..14588
DNA (1263bp) protein (421aa)
Membrane protein ORF149 n=1 Tax=Cyprinid herpesvirus 3 RepID=A3QTV8_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:CDM66375.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_48_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14672..15427
DNA (756bp) protein (252aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXG8_DESAC
ribonuclease III
13_1_20cm_3_scaffold_48_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15625..16521
DNA (897bp) protein (299aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Py
signal peptidase I type (EC:3.4.21.89)
Signal peptidase I, bacterial type n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG16_CHLTF
13_1_20cm_3_scaffold_48_14
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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16736..18289
DNA (1554bp) protein (518aa)
Putative transcriptional regulator, Crp/Fnr family id=4926757 bin=GWA2_Elusimicrobia_69_24 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia rbh
Crp family transcriptional regulator
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_1_20cm_3_scaffold_48_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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18466..19404
DNA (939bp) protein (313aa)
Putative membrane protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZD27_TERRK
Predicted membrane protein {ECO:0000313|EMBL:CDM66372.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_48_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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19880..22243
DNA (2364bp) protein (788aa)
Glycosyl hydrolase, BNR repeat-containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QA7_SOLUE
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:ABJ88163.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candid
BNR repeat-containing glycosyl hydrolase
13_1_20cm_3_scaffold_48_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

22308..23177
DNA (870bp) protein (290aa)
Glycosyl hydrolase, BNR repeat-containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QA7_SOLUE
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:ABJ88163.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candid
BNR repeat-containing glycosyl hydrolase
13_1_20cm_3_scaffold_48_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

23301..24209
DNA (909bp) protein (303aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1263005 spec
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0A5_9FIRM rbh
Pseudouridine-5'-phosphate glycosidase 1
13_1_20cm_3_scaffold_48_19

Not on your lists

24455..25066
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4BGB4_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:AIA11215.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_3_scaffold_48_20
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(25159..25713)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI00034AF480
hypothetical protein Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein
13_1_20cm_3_scaffold_48_21
unknown

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comp(25735..25857)
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_20cm_3_scaffold_48_trna_2
unknown

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comp(25901..25974)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_48_22
unknown

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comp(26015..26404)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_20cm_3_scaffold_48_23
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(26609..26992)
DNA (384bp) protein (128aa)
Cytochrome b subunit of the bc complex {ECO:0000313|EMBL:AEP11528.1}; EC=1.10.2.2 {ECO:0000313|EMBL:AEP11528.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracido
Cytochrome b subunit of the bc complex (EC:1.10.2.2)
Cytochrome b subunit of the bc complex n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI70_CHLTF
13_1_20cm_3_scaffold_48_24
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(26995..28050)
DNA (1056bp) protein (352aa)
Cytochrome b subunit of the bc complex {ECO:0000313|EMBL:AEP11528.1}; EC=1.10.2.2 {ECO:0000313|EMBL:AEP11528.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracido
Cytochrome b subunit of the bc complex (EC:1.10.2.2)
Cytochrome b subunit of the bc complex n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI70_CHLTF
13_1_20cm_3_scaffold_48_25
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(28050..28580)
DNA (531bp) protein (177aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UYF2_TERSS
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:ADV82040.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanens
Rieske (2Fe-2S) domain-containing protein
13_1_20cm_3_scaffold_48_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

28742..29446
DNA (705bp) protein (235aa)
cld2; chlorite dismutase (EC:1.13.11.49)
chlorite dismutase n=1 Tax=Laceyella sacchari RepID=UPI0003B71E0D
Uncharacterized protein {ECO:0000313|EMBL:CDM65500.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_48_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

29483..32281
DNA (2799bp) protein (933aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65499.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_48_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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32462..32872
DNA (411bp) protein (137aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BH26_9BACT
Putative integron gene cassette protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
13_1_20cm_3_scaffold_48_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

33024..33299
DNA (276bp) protein (92aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] id=24455936 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermococcus onnurineus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
acylphosphatase
Displaying items 1-30 of 59 in total

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