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13_1_20cm_3_scaffold_890

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_890_1
Vibrio harveyi, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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98..451
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Vibrio ordalii RepID=UPI00036DF9C0
Uncharacterized protein {ECO:0000313|EMBL:AIV05905.1}; TaxID=669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio harveyi (Beneckea harveyi).
13_1_20cm_3_scaffold_890_2
unknown

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553..1848
DNA (1296bp) protein (432aa)

This feature has no annotations

13_1_20cm_3_scaffold_890_3
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2031..2816
DNA (786bp) protein (262aa)
FRG domain-containing protein {ECO:0000313|EMBL:AJF05879.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalka
FRG domain-containing protein
FRG domain protein id=4256490 bin=GWC2_Pelobacter_58_13 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
13_1_20cm_3_scaffold_890_4
unknown

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3116..3637
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_20cm_3_scaffold_890_5
unknown

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3979..4737
DNA (759bp) protein (253aa)

This feature has no annotations

13_1_20cm_3_scaffold_890_6
RLO_PLX_64_10, Bacteria

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4973..5545
DNA (573bp) protein (191aa)
GCN5-related N-acetyltransferase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2E814_9BACT
yyaR; acetyl-transferase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
acetyl-transferase
13_1_20cm_3_scaffold_890_7
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5621..5968
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RQZ0_SYNP3
Uncharacterized protein {ECO:0000313|EMBL:AFY59888.1}; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 2716
hypothetical protein
13_1_20cm_3_scaffold_890_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6164..6730
DNA (567bp) protein (189aa)
pyrimidine operon attenuation protein/uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFB9_CHLTF
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_890_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6970..8019
DNA (1050bp) protein (350aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=454194 species="Bac
Aspartate carbamoyltransferase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=PYRB_PELCD rbh
pyrB; aspartate carbamyltransferase
13_1_20cm_3_scaffold_890_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7985..9319
DNA (1335bp) protein (445aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=454194 species="B
Dihydroorotase id=4510916 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 rbh
pyrC; dihydroorotase
13_1_20cm_3_scaffold_890_11
unknown

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9300..9551
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_20cm_3_scaffold_890_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9796..10545)
DNA (750bp) protein (250aa)
Putative peptidoglycan binding domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE68_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM66166.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_890_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10833..11060
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64503.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_890_14
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(11113..12021)
DNA (909bp) protein (303aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GQ28_9CYAN rbh
13_1_20cm_3_scaffold_890_15
unknown

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comp(12082..12225)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_20cm_3_scaffold_890_16
Pseudogymnoascus pannorum, Pseudogymnoascus, Leotiomycetes, Ascomycota, Fungi

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12375..13232
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00036410EF
Uncharacterized protein {ECO:0000313|EMBL:KFY66391.1}; TaxID=1420909 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseu
ankyrin repeat-containing protein
13_1_20cm_3_scaffold_890_17
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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13611..14594
DNA (984bp) protein (328aa)
Protoheme IX farnesyltransferase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NMV0_MARHT rbh
Protoheme IX farnesyltransferase {ECO:0000313|EMBL:AEB12689.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrother
protoheme IX farnesyltransferase
13_1_20cm_3_scaffold_890_18
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14695..15072
DNA (378bp) protein (126aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5W6V2_BURSC
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ADG15247.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source
AsnC family transcriptional regulator
Displaying 18 items

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