ggKbase home page

13_1_20cm_3_scaffold_163_11

Organism: 13_1_20CM_3_Acidobacteria_53_8

near complete RP 47 / 55 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(11288..11779)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 166.0
  • Bit_score: 186
  • Evalue 2.20e-44
Peptide deformylase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIN4_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 160.0
  • Bit_score: 167
  • Evalue 1.30e-38
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 160.0
  • Bit_score: 167
  • Evalue 3.60e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGTCTGTCCTGAGAATCACTGAGTACCCGGAAAGAGTTCTCCTTGAGCCTTCCAAACCGGTCGAGCATTTCGATGCAGAATTGGAAAAGCTTTCAGTAGACATGTTCGACACGATGTATAAAGCGGAAGGCGTAGGATTGGCCGCGCCGCAGGTTGGTCTCGCTTTGCGACTTTTCGTGATGGACTGCGAAGGCATTAAGCTAGTGGCCGCAAACCCTGAGATTATTGGTGAAGAAGGCGAGCAGACTGGTGATGAAGGCTGCCTATCAATCGGAAAAGTTTATGCGCCAGTGACGCGCGCCGCTCGTGTGAAACTGCGCGCGCAAGGTGTTCACGGCGAGTGGTTCGAGCGGGAAGCGACCGCTCTGGCCGCGCGTTGCTTTCTGCACGAGACAGATCATCTGAACGGCACACTTTTCATTGACCACCTCACGCCGCTCAAGCGAGACATGGTGAAGAAGCGATTTGTGAAGATAAAGAAGTTCAGGTGA
PROTEIN sequence
Length: 164
MSVLRITEYPERVLLEPSKPVEHFDAELEKLSVDMFDTMYKAEGVGLAAPQVGLALRLFVMDCEGIKLVAANPEIIGEEGEQTGDEGCLSIGKVYAPVTRAARVKLRAQGVHGEWFEREATALAARCFLHETDHLNGTLFIDHLTPLKRDMVKKRFVKIKKFR*