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13_1_20cm_3_scaffold_163

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_163_1
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(81..2789)
DNA (2709bp) protein (903aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035D2938
tolB protein; K03641 TolB protein Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
hypothetical protein
13_1_20cm_3_scaffold_163_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2967..3887)
DNA (921bp) protein (307aa)
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:CDM66993.1}; EC=2.5.1.10 {ECO:0000313|EMBL:CDM66993.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" sour
farnesyl-diphosphate synthase (EC:2.5.1.10)
Geranylgeranyl diphosphate synthase n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJN7_9BACT
13_1_20cm_3_scaffold_163_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3871..4161)
DNA (291bp) protein (97aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit id=4825683 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
exodeoxyribonuclease VII small subunit
13_1_20cm_3_scaffold_163_4
unknown

Not on your lists

comp(4305..5216)
DNA (912bp) protein (304aa)

This feature has no annotations

13_1_20cm_3_scaffold_163_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5209..6621)
DNA (1413bp) protein (471aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit id=4236644 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
exodeoxyribonuclease VII large subunit
13_1_20cm_3_scaffold_163_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6874..7995)
DNA (1122bp) protein (374aa)
von Willebrand factor type A n=1 Tax=uncultured bacterium BLR5 RepID=C0INW1_9BACT
von Willebrand factor type A domain {ECO:0000313|EMBL:CDM65801.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
von Willebrand factor type A domain-containing protein
13_1_20cm_3_scaffold_163_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8041..9780)
DNA (1740bp) protein (580aa)
von Willebrand factor type A domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG47_CHLTF
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:CDM66996.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
von Willebrand factor type A domain-containing protein
13_1_20cm_3_scaffold_163_8
unknown

Not on your lists

comp(9939..10181)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_20cm_3_scaffold_163_9
unknown

Not on your lists

comp(10183..10461)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_3_scaffold_163_10
unknown

Not on your lists

10752..10985
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_3_scaffold_163_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11288..11779)
DNA (492bp) protein (164aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIN4_CHLTF
peptide deformylase
13_1_20cm_3_scaffold_163_12
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11861..13372)
DNA (1512bp) protein (504aa)
WGS project CAIT00000000 data, contig 8 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GM98_9BACT rbh
WGS project CAIT00000000 data, contig 8 {ECO:0000313|EMBL:CCH55025.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ
beta-lactamase
13_1_20cm_3_scaffold_163_13
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

13936..14616
DNA (681bp) protein (227aa)
Peroxiredoxin {ECO:0000256|HAMAP-Rule:MF_00401}; EC=1.11.1.15 {ECO:0000256|HAMAP-Rule:MF_00401};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" sou
1-Cys peroxiredoxin (EC:1.11.1.15) rbh
Probable peroxiredoxin n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKA2_CHLTF rbh
13_1_20cm_3_scaffold_163_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14630..15574
DNA (945bp) protein (315aa)
Cysteine synthase {ECO:0000313|EMBL:CDM66171.1}; EC=2.5.1.47 {ECO:0000313|EMBL:CDM66171.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomo
cysteine synthase (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKA1_CHLTF rbh
13_1_20cm_3_scaffold_163_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15738..16166
DNA (429bp) protein (143aa)
Putative metal-dependent protease of the PAD1/JAB1 superfamily n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKA0_CHLTF
Predicted metal-dependent protease of the PAD1/JAB1 superfamily {ECO:0000313|EMBL:CDM66172.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrino
putative metal-dependent protease
13_1_20cm_3_scaffold_163_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16172..17656
DNA (1485bp) protein (495aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK99_CHLTF
MoaD family protein {ECO:0000313|EMBL:CDM66173.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
molybdopterin and thiamine biosynthesis family dinucleotide-utilizing protein
13_1_20cm_3_scaffold_163_17
unknown

Not on your lists

17808..18011
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_3_scaffold_163_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18354..19961)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXS7_DESAC
Uncharacterized protein {ECO:0000313|EMBL:CDM67038.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_163_19
Microcystis sp. T1-4, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20502..20702
DNA (201bp) protein (67aa)
Uncharacterized protein n=3 Tax=Microcystis RepID=I4FCT2_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI30258.1}; TaxID=1160279 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis sp. T1-4.;"
Zinc finger, YgiT-type
13_1_20cm_3_scaffold_163_20
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20802..21803)
DNA (1002bp) protein (334aa)
Methyltransferase type 12 n=2 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J4Q3_NOSP7
Methyltransferase type 12 {ECO:0000313|EMBL:KGF73250.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola
methyltransferase type 12
13_1_20cm_3_scaffold_163_21
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(22304..23572)
DNA (1269bp) protein (423aa)
ABC transporter related n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6K9_HERA2
ABC transporter-like protein Tax=RBG_16_Chloroflexi_57_11_curated
ABC transporter-like protein
13_1_20cm_3_scaffold_163_22
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(23585..23953)
DNA (369bp) protein (123aa)
cysU; sulfate transport system permease CysU; K02046 sulfate transport system permease protein Tax=RBG_13_Chloroflexi_66_10_curated
sulfate ABC transporter permease; K02046 sulfate transport system permease protein id=14623749 bin=bin5_DeltaP species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
sulfate ABC transporter permease
13_1_20cm_3_scaffold_163_23
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(23928..24311)
DNA (384bp) protein (128aa)
ABC-type sulfate transport system, permease component n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SXM7_9GAMM
cysU; sulfate transport system permease CysU; K02046 sulfate transport system permease protein Tax=RBG_13_Chloroflexi_68_17_curated
sulfate ABC transporter permease
13_1_20cm_3_scaffold_163_24
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(24449..25543)
DNA (1095bp) protein (365aa)
Sulfate ABC transporter, periplasmic binding protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHW8_9BACT
sulfate ABC transporter substrate-binding protein; K02048 sulfate transport system substrate-binding protein Tax=RBG_13_Chloroflexi_66_10_curated
sbpA; sulfate ABC transporter substrate-binding protein
13_1_20cm_3_scaffold_163_25
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(25643..26383)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021M2_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ84365.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
13_1_20cm_3_scaffold_163_26

Not on your lists

comp(26534..29167)
DNA (2634bp) protein (878aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM90004.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Putative geranylgeranyl reductase id=2532270 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes rbh
13_1_20cm_3_scaffold_163_27
unknown

Not on your lists

comp(29500..29688)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_3_scaffold_163_28
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(29701..30141)
DNA (441bp) protein (147aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Uncharacterized protein id=2726235 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
13_1_20cm_3_scaffold_163_29
Acinetobacter sp. COS3, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30243..30872)
DNA (630bp) protein (210aa)
Transposase n=1 Tax=Acinetobacter sp. COS3 RepID=U7GTQ7_9GAMM
Transposase {ECO:0000313|EMBL:ERS00231.1}; TaxID=1397525 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. COS3.;"
transposase-like protein
Displaying 29 items

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