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13_1_20cm_3_scaffold_40_12

Organism: 13_1_20CM_3_Acidobacteria_53_8

near complete RP 47 / 55 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(12266..12883)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK33_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 180
  • Evalue 1.80e-42
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 180
  • Evalue 2.60e-42
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 180
  • Evalue 5.20e-43

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Taxonomy

Chloracidobacterium thermophilum → Chloracidobacterium → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGATGTGTTGCGGCTGGCGAGAGAGCCGGACGTGTGTGACGGAGCTACCATGAGCGGTTCCGATTCTCTTGTTGTGCGCGCACGCCGTGGCGACGAAGATGCCTTCCGCATGATCTTCGAGCGGTACGCTCGCCCCCTGCTCGCATTCATCTACGATATGGTGGGGGAACGCGCGCTTGCCGAAGAGTTAACGCAAGAGACTTTCGTGCGAGCCTATAAAAACTTGAGCGCGCTGCGCGACGAGCGTCGCTTCGGCGTGTGGCTCTTCGGCATAGCGAAGAACGTCGCGCGAGAATCGCTTCGCTCTCACCCAAGACGAGAGCGCGAAACGCTTATTGACGACGAGCGAGTTTTGGCGATGAGCGATAATCAGCCTTCGCCTGCTGGCATACTGCTCGACAAAGAGTTGCAGCGGGTTATGCGCGCGGCGCTTCAGAGTCTGGACGAGGACAAACGCTTGGTTTTCATTCTGAAGATATTTCACCATAAGAGCTATGATGAGATAGCCGCGATCACTGGCTTCACAATCGCCAAGCTAAAGACAGATTTGCACCGTGCCCGCGCAGAGATGCGACGCCGCATACGCCCGTACCTGGAGGCAGGCCATGAAGTGTGA
PROTEIN sequence
Length: 206
MDVLRLAREPDVCDGATMSGSDSLVVRARRGDEDAFRMIFERYARPLLAFIYDMVGERALAEELTQETFVRAYKNLSALRDERRFGVWLFGIAKNVARESLRSHPRRERETLIDDERVLAMSDNQPSPAGILLDKELQRVMRAALQSLDEDKRLVFILKIFHHKSYDEIAAITGFTIAKLKTDLHRARAEMRRRIRPYLEAGHEV*