ggKbase home page

13_1_20cm_3_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_40_1
R_OP11_Levybacteria_37_33, Levybacteria, Microgenomates, Bacteria

Not on your lists

1..1086
DNA (1086bp) protein (362aa)
Citrate transporter n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQV8_9FIRM
citrate transporter Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_37_33_curated
transporter
13_1_20cm_3_scaffold_40_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1097..2866
DNA (1770bp) protein (590aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9U2_SINAD
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGA25640.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; S
multidrug ABC transporter ATPase/permease
13_1_20cm_3_scaffold_40_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2883..3938
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000300B776 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC62242.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
metallophosphoesterase
13_1_20cm_3_scaffold_40_4
Scytonema hofmanni, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4636..5403
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034C9117
13_1_20cm_3_scaffold_40_5
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5503..7206
DNA (1704bp) protein (568aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; T
Signal transduction histidine kinase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZFF8_TERRK
signal transduction histidine kinase
13_1_20cm_3_scaffold_40_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7203..7529
DNA (327bp) protein (109aa)
Uncharacterized conserved protein n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DXJ3_METI4
Uncharacterized protein {ECO:0000313|EMBL:CDM66371.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_40_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7534..8874
DNA (1341bp) protein (447aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCX3_SINAD
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AGA26688.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Pl
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
13_1_20cm_3_scaffold_40_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8921..9310
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036850BB
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30209.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
13_1_20cm_3_scaffold_40_9
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9307..9957
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B5C32A
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30208.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
hypothetical protein
13_1_20cm_3_scaffold_40_10
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(10044..11276)
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK35_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:AEP13202.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
hypothetical protein
13_1_20cm_3_scaffold_40_11
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(11377..12276)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK34_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:AEP13201.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
hypothetical protein
13_1_20cm_3_scaffold_40_12
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(12266..12883)
DNA (618bp) protein (206aa)
RNA polymerase sigma factor n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK33_CHLTF
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum
sigma-70 family RNA polymerase sigma factor
13_1_20cm_3_scaffold_40_13
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13137..14015)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI0003808F03
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
peptidase S1 and S6 chymotrypsin/Hap
13_1_20cm_3_scaffold_40_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(14143..15282)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027C5_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ82888.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
hypothetical protein
13_1_20cm_3_scaffold_40_15
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15495..16028
DNA (534bp) protein (178aa)
membrane-bound metal-dependent hydrolase; K07038 inner membrane protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
membrane-bound metal-dependent hydrolase
Membrane-bound metal-dependent hydrolase id=4966273 bin=GWA2_Ignavibacteria_55_11 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_20cm_3_scaffold_40_16
unknown

Not on your lists

comp(16153..16533)
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_3_scaffold_40_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16928..18928
DNA (2001bp) protein (667aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8A8_9SPHI rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24927.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mu
ferritin-like family protein
13_1_20cm_3_scaffold_40_18
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18949..19869
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8A9_9SPHI rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24928.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mu
hypothetical protein
13_1_20cm_3_scaffold_40_19
Spongiobacter sp. S2292, Spongiobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19866..20720
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas sp. Bsw20308 RepID=M5H0P5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJZ29133.1}; TaxID=579607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Spongiobacter.;" source="Spongiobacter sp. S2292.;"
hypothetical protein
13_1_20cm_3_scaffold_40_20
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

21098..21394
DNA (297bp) protein (99aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
13_1_20cm_3_scaffold_40_21
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21581..22003
DNA (423bp) protein (141aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Brevibacillus sp. BC25 RepID=J2PSS8_9BACL
hypothetical protein Tax=GWB2_Ignavibacteria_35_6b_curated
Glyoxalase family protein
13_1_20cm_3_scaffold_40_22
unknown

Not on your lists

22086..22358
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_20cm_3_scaffold_40_23
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22696..23211
DNA (516bp) protein (172aa)
Membrane protein-like protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDV0_GEOUR
Membrane protein-like protein {ECO:0000313|EMBL:ABQ24237.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter ura
hypothetical protein
13_1_20cm_3_scaffold_40_24
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23575..23955
DNA (381bp) protein (127aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09E99_STIAD
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO74690.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU70021.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcale
hypothetical protein
13_1_20cm_3_scaffold_40_25
unknown

Not on your lists

comp(24022..24237)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_3_scaffold_40_26
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(24577..25893)
DNA (1317bp) protein (439aa)
NADPH dehydrogenase {ECO:0000313|EMBL:AFY44898.1}; EC=1.6.99.1 {ECO:0000313|EMBL:AFY44898.1};; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC
NADPH dehydrogenase (EC:1.6.99.1)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003494DEF rbh
13_1_20cm_3_scaffold_40_27
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26702..29320
DNA (2619bp) protein (873aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0G4_NITHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ADE14490.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
hypothetical protein
13_1_20cm_3_scaffold_40_28
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29352..30749
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI0003687362 rbh
Putative oxidoreductase {ECO:0000313|EMBL:BAK33801.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (st
oxidoreductase
13_1_20cm_3_scaffold_40_29
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30933..31439)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036E807E
Putative acetyltransferase {ECO:0000313|EMBL:EFG03830.2}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain
putative acetyltransferase
13_1_20cm_3_scaffold_40_30
unknown

Not on your lists

comp(31937..32170)
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

View Taxonomy