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13_1_40cm_4_scaffold_10081

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_10081_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3..530)
DNA (528bp) protein (176aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQS5_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF57782.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera
dehydrogenase
13_1_40cm_4_scaffold_10081_2
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1948..2544)
DNA (597bp) protein (199aa)
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12556812 bin=CNBR_ACIDO species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:AEB10206.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulf
13_1_40cm_4_scaffold_10081_3
unknown

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3039..3383
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_4_scaffold_10081_4
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3660..4256
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6K304_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB56627.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" so
13_1_40cm_4_scaffold_10081_5
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4857..5087
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=RBG_16_Desulfobacca_60_12_curated
13_1_40cm_4_scaffold_10081_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(5084..6244)
DNA (1161bp) protein (387aa)
Secretion protein HlyD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ80_KORVE
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABF43070.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
13_1_40cm_4_scaffold_10081_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6398..8254)
DNA (1857bp) protein (619aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Histidine protein kinase AsgD n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PBY9_9DELT
PAS sensor protein
13_1_40cm_4_scaffold_10081_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8453..9103
DNA (651bp) protein (217aa)
ABC transporter related protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTD4_9EURY
ABC transporter related protein {ECO:0000313|EMBL:EFW91863.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
ABC transporter ATPase
13_1_40cm_4_scaffold_10081_9
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9100..9888
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034AE2B0
Permease of an ABC transporter {ECO:0000313|EMBL:KJR98567.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
hypothetical protein
13_1_40cm_4_scaffold_10081_10
Chondromyces crocatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9885..10649)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Chondromyces crocatus RepID=G4RJC4_CHOCO
Regulatory protein {ECO:0000313|EMBL:AIR74922.1}; TaxID=52 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces croca
hypothetical protein
13_1_40cm_4_scaffold_10081_11
unknown

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10807..10986
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_4_scaffold_10081_12
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11036..11776)
DNA (741bp) protein (247aa)
Regulatory protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SGR1_9DELT
Regulatory protein {ECO:0000313|EMBL:ERK87665.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
hypothetical protein
13_1_40cm_4_scaffold_10081_13
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12027..13202
DNA (1176bp) protein (392aa)
fumarate hydratase, class II (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1619233 species="Bacteria; Prot
Fumarate hydratase class II n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YAS3_MESOW
13_1_40cm_4_scaffold_10081_14
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13209..14471
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7949
Uncharacterized protein {ECO:0000313|EMBL:AHE66414.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella oakridgensi
hypothetical protein
13_1_40cm_4_scaffold_10081_15
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14468..15142
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F86D76
membrane protein
Membrane protein {ECO:0000313|EMBL:AIF48092.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
13_1_40cm_4_scaffold_10081_16
Vibrio rumoiensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15143..16285)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Vibrio rumoiensis RepID=UPI00036B171A
13_1_40cm_4_scaffold_10081_17
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16282..17085)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Vibrio rumoiensis RepID=UPI00036B171A
multicopper oxidase
Putative multicopper oxidase {ECO:0000313|EMBL:CAL75203.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobiu
Displaying 17 items

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