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13_1_40cm_4_scaffold_11154

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_11154_1
unknown

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comp(2..85)
DNA (84bp) protein (28aa)

This feature has no annotations

13_1_40cm_4_scaffold_11154_2
unknown

Not on your lists

comp(82..351)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_4_scaffold_11154_3
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(392..1936)
DNA (1545bp) protein (515aa)
Peptide chain release factor 3 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PQ38_9DELT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltapr
prfC; peptide chain release factor 3
13_1_40cm_4_scaffold_11154_trna_1
unknown

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comp(2011..2090)
DNA (80bp)
transferRNA
13_1_40cm_4_scaffold_11154_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

2188..2709
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEQ3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_4_scaffold_11154_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2715..2891)
DNA (177bp) protein (59aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
13_1_40cm_4_scaffold_11154_6
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

3033..3569
DNA (537bp) protein (179aa)
petC; Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) (EC:1.10.9.1) Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
petC; Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) (EC:1.10.9.1)
Similar to Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG49_9BACT
13_1_40cm_4_scaffold_11154_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3572..4138
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI0003828C3E
petB; cytochrome b6 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
petB; cytochrome b6
13_1_40cm_4_scaffold_11154_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

4122..4298
DNA (177bp) protein (59aa)
petB; cytochrome b6 id=14429794 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
petB; cytochrome b6 Tax=CSP1_5_NC10
petB; cytochrome b6
13_1_40cm_4_scaffold_11154_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

4313..5134
DNA (822bp) protein (274aa)
hypothetical protein id=14429795 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_4_scaffold_11154_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5181..8456
DNA (3276bp) protein (1092aa)
Hypothetical octaheam cytochrome c n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG46_9BACT
octaheme cytochrome c Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
octaheme cytochrome c
13_1_40cm_4_scaffold_11154_11
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8577..9275
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUY6_SORCE
Uncharacterized protein {ECO:0000313|EMBL:KFE72386.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_1_40cm_4_scaffold_11154_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9400..10428
DNA (1029bp) protein (343aa)
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Cytochrome oxidase assembly id=2974177 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
cytochrome oxidase assembly family protein
13_1_40cm_4_scaffold_11154_13
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10425..11675
DNA (1251bp) protein (417aa)
Protoheme IX farnesyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XII3_SORCE
Heme O synthase, protoheme IX farnesyltransferase {ECO:0000313|EMBL:AKF10682.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sanda
protoheme IX farnesyltransferase
13_1_40cm_4_scaffold_11154_14
RLO_PLX_64_10, Bacteria

Not on your lists

11675..12388
DNA (714bp) protein (238aa)
cyoA; Heme/copper-type cytochrome oxidase, subunit 2; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Cytochrome c oxidase subunit II id=4406650 bin=GWA2_OP3_52_12 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
cyoA; Heme/copper-type cytochrome oxidase, subunit 2
Displaying 15 items

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