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13_1_40cm_4_scaffold_1381

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1381_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..405
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI000367A255
Uncharacterized protein {ECO:0000313|EMBL:ETR75804.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
13_1_40cm_4_scaffold_1381_2
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(407..1057)
DNA (651bp) protein (217aa)
50S ribosomal protein L3 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=RL3_ANADE
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
13_1_40cm_4_scaffold_1381_3
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1346..2194
DNA (849bp) protein (283aa)
Transglycosylase SLT domain protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P1E1_9DELT
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EPX56946.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;
transglycosylase slt domain-containing protein
13_1_40cm_4_scaffold_1381_4
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2251..2463
DNA (213bp) protein (71aa)
CsbD family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MP30_CORCM
CsbD family protein
CsbD family protein {ECO:0000313|EMBL:AFE07581.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallo
13_1_40cm_4_scaffold_1381_5
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2558..3208)
DNA (651bp) protein (217aa)
Histidine kinase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J815_ANAD2
Sensor protein RstB {ECO:0000313|EMBL:GAO03731.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" sour
histidine kinase
13_1_40cm_4_scaffold_1381_6
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3418..4326
DNA (909bp) protein (303aa)
RNA polymerase sigma factor n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBF5_ANADF
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source
RNA polymerase sigma factor RpoH
13_1_40cm_4_scaffold_1381_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4356..5528
DNA (1173bp) protein (391aa)
Major facilitator superfamily MFS_1 transporter n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IHG2_ANADE
major facilitator superfamily protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
major facilitator transporter
13_1_40cm_4_scaffold_1381_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5532..6821)
DNA (1290bp) protein (430aa)
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=ENO_ANADF
eno; phosphopyruvate hydratase
13_1_40cm_4_scaffold_1381_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6921..7763
DNA (843bp) protein (281aa)
3-ketoacyl-ACP reductase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNX7_SORCE
3-ketoacyl-ACP reductase
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:AGP32358.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
13_1_40cm_4_scaffold_1381_10
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7865..8044)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQP7_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI67961.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
13_1_40cm_4_scaffold_1381_11
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8219..8683)
DNA (465bp) protein (155aa)
Putative oligoketide cyclase/dehydratase or lipid transport protein YfjG n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2STZ4_9DELT
putative cyclase/dehydrase Tax=GWA2_Deltaproteobacteria_45_12_curated
cyclase/dehydrase
13_1_40cm_4_scaffold_1381_12
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8847..9809)
DNA (963bp) protein (321aa)
glpX; fructose-1,6-bisphosphatase, class II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
glpX; fructose-1,6-bisphosphatase, class II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase id=4920911 bin=GWC2_Deltaproteobacteria_42_51 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_1381_13
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9802..10248)
DNA (447bp) protein (149aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RBG_16_Anaeromyxobacter_69_14_curated
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TDK6_DESML
thioesterase family protein
13_1_40cm_4_scaffold_1381_14
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10262..10816)
DNA (555bp) protein (185aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FYR9_STIAD
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1381_15
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10813..11754)
DNA (942bp) protein (314aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCD1_ANADF
HEAT repeat-containing PBS lyase
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ABS26377.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxoba
13_1_40cm_4_scaffold_1381_16
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11799..13499)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JAD2_ANAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL65651.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_1381_17
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13618..15783
DNA (2166bp) protein (722aa)
Pyrrolo-quinoline quinone n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCD3_ANADF
Pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABS26379.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_4_scaffold_1381_18
unknown

Not on your lists

comp(15856..16284)
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_40cm_4_scaffold_1381_19
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16327..17499)
DNA (1173bp) protein (391aa)
lepB; signal peptidase i (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae;
Signal peptidase I n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FMN5_STIAD
13_1_40cm_4_scaffold_1381_20
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17496..19304)
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=LEPA_ANADE
GTP-binding protein LepA
13_1_40cm_4_scaffold_1381_21
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19371..20309)
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FMN2_STIAD
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:ADO71813.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae;
13_1_40cm_4_scaffold_1381_22
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20309..20668)
DNA (360bp) protein (120aa)
Cupin domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C839_MYXFH
cupin Tax=RBG_16_Anaeromyxobacter_69_14_curated
cupin domain-containing protein
13_1_40cm_4_scaffold_1381_23
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20671..21315)
DNA (645bp) protein (215aa)
Sporulation domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP3_ANADF
sporulation domain-containing protein
Sporulation domain protein {ECO:0000313|EMBL:ABS26489.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;
13_1_40cm_4_scaffold_1381_24
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21368..23137)
DNA (1770bp) protein (590aa)
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:
Arginine--tRNA ligase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=SYR_ANADE
argS; arginyl-tRNA synthetase
13_1_40cm_4_scaffold_1381_25
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23131..23637)
DNA (507bp) protein (169aa)
Histidine triad (HIT) protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP6_ANADF
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ABS26492.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
13_1_40cm_4_scaffold_1381_26
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23637..24587)
DNA (951bp) protein (317aa)
signal peptide peptidase SppA, 36K type (EC:3.1.3.2); K04773 protease IV [EC:3.4.21.-] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Signal peptide peptidase SppA, 36K type n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP7_ANADF
signal peptide peptidase SppA, 36K type
13_1_40cm_4_scaffold_1381_27
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(25116..26621)
DNA (1506bp) protein (502aa)
Glr0176 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NP81_GLOVI
hypothetical protein
Glr0176 protein {ECO:0000313|EMBL:BAC88117.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_1_40cm_4_scaffold_1381_28
unknown

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26738..27646
DNA (909bp) protein (303aa)

This feature has no annotations

13_1_40cm_4_scaffold_1381_29
unknown

Not on your lists

28061..28273
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_1381_30
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29050..29514)
DNA (465bp) protein (155aa)
Enoyl-CoA hydratase (EC:4.2.1.17)
Acyl dehydratase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q316_9DELT
Dehydratase {ECO:0000313|EMBL:KFA91475.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter vi
Displaying items 1-30 of 39 in total

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