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13_1_40cm_4_scaffold_1593

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1593_1
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(75..764)
DNA (690bp) protein (230aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=TRMD_ANADE
13_1_40cm_4_scaffold_1593_2
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(767..1255)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00035FBB9A
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
ribosome maturation factor RimM
13_1_40cm_4_scaffold_1593_3
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1262..1525)
DNA (264bp) protein (88aa)
30S ribosomal protein S16 n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MGL7_CORCM
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
13_1_40cm_4_scaffold_1593_4
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1618..2493)
DNA (876bp) protein (292aa)
succinyl-CoA synthetase subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UCW4_MYXSD
succinyl-CoA synthetase subunit alpha
13_1_40cm_4_scaffold_1593_5
unknown

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comp(2490..2933)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_4_scaffold_1593_6
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2934..4109)
DNA (1176bp) protein (392aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=SUCC_ANADE
13_1_40cm_4_scaffold_1593_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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4251..5270
DNA (1020bp) protein (340aa)
Uncharacterized protein id=4987446 bin=GWA2_OP3_53_43 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86544.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_4_scaffold_1593_8
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5258..5701
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00036814D3
Uncharacterized protein {ECO:0000313|EMBL:KGM41228.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
13_1_40cm_4_scaffold_1593_9
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5703..7091
DNA (1389bp) protein (463aa)
Methyl accepting chemotaxis protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUN6_CORCM
Methyl accepting chemotaxis protein {ECO:0000313|EMBL:KFE64285.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;"
tsr1; methyl accepting chemotaxis protein
13_1_40cm_4_scaffold_1593_10
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(7159..8829)
DNA (1671bp) protein (557aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S788_9CYAN
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:AFY65629.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema
13_1_40cm_4_scaffold_1593_11
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8973..9815
DNA (843bp) protein (281aa)
Histone deacetylase family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CDV3_MYXFH
histone deacetylase family protein
Histone deacetylase family protein {ECO:0000313|EMBL:AEI62312.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" sour
13_1_40cm_4_scaffold_1593_12
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9819..10751)
DNA (933bp) protein (311aa)
Sel1 domain protein repeat-containing protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LS08_HALO1
TPR repeat, SEL1 subfamily {ECO:0000313|EMBL:AKF05751.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sand
Sel1 domain-containing protein repeat-containing protein
13_1_40cm_4_scaffold_1593_13
unknown

Not on your lists

comp(10752..11057)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_1593_14
unknown

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comp(11137..11430)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_4_scaffold_1593_15
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11494..12273)
DNA (780bp) protein (260aa)
sdhB; succinate dehydrogenase, iron-sulfur protein (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur protein {ECO:0000313|EMBL:EAU64938.1}; EC=1.3.99.1 {ECO:0000313|EMBL:EAU64938.1};; Succinate dehydrogenase, iron-sulfur protein {ECO:0000313|EMBL:ADO71839.1}; EC=1.
Succinate dehydrogenase iron-sulfur protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08WU0_STIAD
13_1_40cm_4_scaffold_1593_16
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12279..12851)
DNA (573bp) protein (191aa)
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UCE2_MYXSD
succinate dehydrogenase flavoprotein subunit
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:AGC45728.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococ
Displaying 16 items

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