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13_1_40cm_4_scaffold_1701

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1701_1
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..961
-----------------
DNA (960bp)
protein (320aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D4995
Selenocysteine lyase {ECO:0000313|EMBL:KGQ19592.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensi
twin-arginine translocation pathway signal protein
13_1_40cm_4_scaffold_1701_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1070..2290)
-----------------
DNA (1221bp)
protein (407aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
Imidazolonepropionase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MLZ1_CORCM
hutI; imidazolonepropionase
13_1_40cm_4_scaffold_1701_3
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2290..3945)
-----------------
DNA (1656bp)
protein (552aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
Urocanate hydratase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UB60_MYXSD
urocanate hydratase
13_1_40cm_4_scaffold_1701_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3981..4433
-----------------
DNA (453bp)
protein (151aa)
CoA-binding protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPV5_SORCE
CoA-binding protein
CoA-binding protein {ECO:0000313|EMBL:AGP32653.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellu
13_1_40cm_4_scaffold_1701_5
Listeria innocua, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4406..5077)
-----------------
DNA (672bp)
protein (224aa)
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein (EC:2.1.1.10)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=272626 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Lister
Methylenetetrahydrofolate reductase n=1 Tax=Listeria monocytogenes FSL J1-208 RepID=H7CL67_LISMN
13_1_40cm_4_scaffold_1701_6
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5074..6462)
-----------------
DNA (1389bp)
protein (463aa)
Beta-lactamase domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J990_ANAD2
Metallo-beta-lactamase family protein, RNA-specific {ECO:0000313|EMBL:KFE69468.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae
beta-lactamase domain-containing protein
13_1_40cm_4_scaffold_1701_7
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6613..7269
-----------------
DNA (657bp)
protein (219aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKN6_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO04749.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_4_scaffold_1701_8
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7759..8583)
-----------------
DNA (825bp)
protein (275aa)
hypothetical protein; K01046 triacylglycerol lipase [EC:3.1.1.3] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJP4_HALO1
hypothetical protein
13_1_40cm_4_scaffold_1701_9
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8800..10263)
-----------------
DNA (1464bp)
protein (488aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MSE9_CORCM
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1701_10
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10393..10758
-----------------
DNA (366bp)
protein (122aa)
NUDIX hydrolase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBZ9_ANADF
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABS26245.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="A
13_1_40cm_4_scaffold_1701_11
unknown

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comp(10734..10919)
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

13_1_40cm_4_scaffold_1701_12
unknown

Not on your lists

comp(11070..11237)
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_1701_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(11289..12074)
-----------------
DNA (786bp)
protein (262aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ELZ1_9FIRM
Os01g0574550; Hypothetical protein. Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
similar to 26S proteasome regulatory subunit
13_1_40cm_4_scaffold_1701_14
unknown

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comp(12102..12323)
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_1701_15
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

12434..12706
-----------------
DNA (273bp)
protein (91aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23;
ftsH; ATP-dependent metalloprotease ftsh (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PCH4_9DELT
13_1_40cm_4_scaffold_1701_16
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12798..13058
-----------------
DNA (261bp)
protein (87aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CN33_MYXFH
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1701_17
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13218..14828
-----------------
DNA (1611bp)
protein (537aa)
protease Do (EC:3.4.21.107) Tax=RBG_16_Deltaproteobacteria_64_85_curated
protease Do (EC:3.4.21.107)
Protease Do n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UC66_ANASK
13_1_40cm_4_scaffold_1701_18
unknown

Not on your lists

comp(14846..15193)
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

13_1_40cm_4_scaffold_1701_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15802..17562)
-----------------
DNA (1761bp)
protein (587aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y1N8_SORCE
hypothetical protein
13_1_40cm_4_scaffold_1701_20
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17615..19093)
-----------------
DNA (1479bp)
protein (493aa)
glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase {ECO:0000313|EMBL:EAU67491.1}; EC=1.4.1.3 {ECO:0000313|EMBL:EAU67491.1};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; C
Glutamate dehydrogenase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q095S1_STIAD
13_1_40cm_4_scaffold_1701_21
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(19245..19574)
-----------------
DNA (330bp)
protein (110aa)
Cytochrome c family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJD2_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC84059.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
13_1_40cm_4_scaffold_1701_22
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19571..20116)
-----------------
DNA (546bp)
protein (182aa)
Transcriptional regulator-like protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7Z1_ANADF
transcriptional regulator-like protein
Transcriptional regulator-like protein {ECO:0000313|EMBL:ABS24837.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
13_1_40cm_4_scaffold_1701_23
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20079..21575)
-----------------
DNA (1497bp)
protein (499aa)
Transcriptional regulator n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INH4_ANADE
DeoR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABC80356.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_4_scaffold_1701_24
unknown

Not on your lists

comp(21575..21799)
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

13_1_40cm_4_scaffold_1701_25
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21941..23092
-----------------
DNA (1152bp)
protein (384aa)
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative n=2 Tax=Geobacter sulfurreducens RepID=D7AKJ8_GEOSK
branched chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
branched-chain amino acid ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_1701_26
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23195..23794)
-----------------
DNA (600bp)
protein (200aa)
Adenylate/guanylate cyclase domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FYX2_STIAD
adenylate/guanylate cyclase domain-containing protein
Adenylate/guanylate cyclase domain protein {ECO:0000313|EMBL:ADO72435.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmat
13_1_40cm_4_scaffold_1701_27
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24248..25042)
-----------------
DNA (795bp)
protein (265aa)
Alpha/beta hydrolase fold n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHE1_ANADF
alpha/beta hydrolase fold protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
alpha/beta hydrolase fold protein
13_1_40cm_4_scaffold_1701_28
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25054..25410)
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZC9_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDM81013.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesio
13_1_40cm_4_scaffold_1701_29
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25525..26364
-----------------
DNA (840bp)
protein (280aa)
Carotenoid synthesis regulator CarF n=2 Tax=Myxococcus xanthus RepID=Q1D0D6_MYXXD
Carotenoid synthesis regulator CarF {ECO:0000313|EMBL:KFA93984.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;
carF; carotenoid synthesis regulator CarF
13_1_40cm_4_scaffold_1701_30
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26409..26747
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S5P9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK91051.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
IclR-like transcriptional regulator
Displaying items 1-30 of 33 in total

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