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13_1_40cm_4_scaffold_2042

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2042_1
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..851)
DNA (849bp) protein (283aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; My
Sensor histidine kinase/response regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8ML78_CORCM
gacS3; sensor histidine kinase/response regulator
13_1_40cm_4_scaffold_2042_2
unknown

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comp(1175..1558)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_4_scaffold_2042_3
unknown

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comp(1558..1962)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_4_scaffold_2042_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(2034..2168)
DNA (135bp) protein (45aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_4_scaffold_2042_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2287..2625)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037B4067
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_2042_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2739..3596
DNA (858bp) protein (286aa)
5'-3' exonuclease n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J5X2_ANAD2
5'-3' exonuclease Tax=RBG_16_Anaeromyxobacter_69_14_curated
5'-3' exonuclease
13_1_40cm_4_scaffold_2042_7
Pteropus alecto, Pteropus, Chiroptera, Mammalia, Chordata, Metazoa

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3593..4195
DNA (603bp) protein (201aa)
Rootletin (Fragment) n=1 Tax=Pteropus alecto RepID=L5KSH6_PTEAL
Rootletin {ECO:0000313|EMBL:ELK14404.1}; Flags: Fragment;; TaxID=9402 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Megachi
PLEC; plectin
13_1_40cm_4_scaffold_2042_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4196..4753)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAH3_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS25719.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_2042_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4908..5675
DNA (768bp) protein (256aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF94_ANADF
Dioxygenase {ECO:0000313|EMBL:KFA92949.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter vi
extradiol ring-cleavage dioxygenase class III protein subunit B
13_1_40cm_4_scaffold_2042_10
unknown

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5784..6047
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_4_scaffold_2042_11

Not on your lists

comp(6023..7522)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C8385
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49274.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative peptidase M20 family protein
13_1_40cm_4_scaffold_2042_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7649..9709
DNA (2061bp) protein (687aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJJ9_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC81826.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_2042_13
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9796..10092
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA92058.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
13_1_40cm_4_scaffold_2042_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10236..11918
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PD18_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39441.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
branched-chain amino acid ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_2042_15
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11925..13409)
DNA (1485bp) protein (495aa)
Peptidase S41 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEN0_ANADF
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:ABS27176.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Ana
13_1_40cm_4_scaffold_2042_16
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13872..14684
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000370BF2B
Chromate transporter {ECO:0000313|EMBL:EAQ05444.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldens
chromate transport protein ChrA
13_1_40cm_4_scaffold_2042_17
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14681..15202
DNA (522bp) protein (174aa)
Lipid A 3-O-deacylase-like protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JR04_9PROT
Lipid A 3-O-deacylase-like protein {ECO:0000313|EMBL:EKE76962.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oc
hypothetical protein
Displaying 17 items

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