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13_1_40cm_4_scaffold_223

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_223_1
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1959
DNA (1959bp) protein (653aa)
TonB-dependent receptor n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FG61_STIAD
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADO68996.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
13_1_40cm_4_scaffold_223_2
unknown

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comp(2032..2319)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_4_scaffold_223_3
unknown

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2629..2838
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_4_scaffold_223_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3180..3707
DNA (528bp) protein (176aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGS2_ANADF
uracil-DNA glycosylase superfamily protein
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ABS27918.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxo
13_1_40cm_4_scaffold_223_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3769..4467
DNA (699bp) protein (233aa)
Phosphate regulon transcriptional regulatory protein PhoB (SphR) n=1 Tax=Cystobacter fuscus DSM 2262 PF40_9DELT">RepID=S9PF40_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF04692.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
regX; Phosphate regulon transcriptional regulatory protein
13_1_40cm_4_scaffold_223_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4492..5265)
DNA (774bp) protein (258aa)
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGW9_ANADF
NADH ubiquinone oxidoreductase 20 kDa subunit Tax=RBG_16_Anaeromyxobacter_69_14_curated
NADH ubiquinone oxidoreductase 20 kDa subunit
13_1_40cm_4_scaffold_223_7
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5275..6795)
DNA (1521bp) protein (507aa)
NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QXY1_ISOPI
NADH dehydrogenase (ubiquinone) 30 kDa subunit Tax=CG_Delta_07
NADH dehydrogenase (ubiquinone) 30 kDa subunit
13_1_40cm_4_scaffold_223_8
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6798..8225)
DNA (1428bp) protein (476aa)
Ech-hydrogenase-related complex, HyfF-like integral membrane subunit n=2 Tax=Geobacter metallireducens RepID=Q39YQ9_GEOMG
ehrD-2; Ech-hydrogenase-related complex, HyfF-like integral membrane subunit
Ech-hydrogenase-related complex, HyfF-like integral membrane subunit {ECO:0000313|EMBL:ABB30615.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacterac
13_1_40cm_4_scaffold_223_9
CG_Omnitr_06, Omnitrophica, Bacteria

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comp(8229..8882)
DNA (654bp) protein (218aa)
NAD-dependent dehydrogenase subunit; K12140 hydrogenase-4 component E [EC:1.-.-.-] Tax=CG_Omnitr_06
NAD-dependent dehydrogenase subunit id=3898017 bin=GWC2_OP3-like_45_7 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
NAD-dependent dehydrogenase subunit
13_1_40cm_4_scaffold_223_10
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8879..9793)
DNA (915bp) protein (305aa)
Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGW5_ANADF
Formate hydrogenlyase subunit 4 {ECO:0000313|EMBL:GAO03828.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxoba
respiratory-chain NADH dehydrogenase subunit 1
13_1_40cm_4_scaffold_223_11
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9790..11748)
DNA (1959bp) protein (653aa)
hyfB; protein HyfB; K12137 hydrogenase-4 component B [EC:1.-.-.-] Tax=RifOxyA12_full_Proteobacteria_58_15_curated
Hydrogenase-4 component B n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSS3_9BACT
NADH dehydrogenase (quinone)
13_1_40cm_4_scaffold_223_12
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11745..13724)
DNA (1980bp) protein (660aa)
hyfB; protein HyfB; K12137 hydrogenase-4 component B [EC:1.-.-.-] Tax=RifOxyA12_full_Proteobacteria_58_15_curated
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Hydrogenase-4 component B id=4210795 bin=GWC2_Elusimicrobia_64_44 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
13_1_40cm_4_scaffold_223_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(13724..14413)
DNA (690bp) protein (230aa)
putative PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=GWC2_Gemmatimonadetes_71_10_curated
PTS IIA-like nitrogen-regulatory protein PtsN id=3690065 bin=GWA2_Elusimicrobia_69_24 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
13_1_40cm_4_scaffold_223_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14587..15972
DNA (1386bp) protein (462aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGW0_ANADF
two component sigma54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS27956.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterinea
13_1_40cm_4_scaffold_223_15
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16012..16446
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Anaeromyxobacter RepID=B4UDW3_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC83418.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_223_16
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16450..16968)
DNA (519bp) protein (173aa)
Peptidoglycan-associated lipoprotein id=3942998 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
OmpA/MotB protein; K03640 peptidoglycan-associated lipoprotein Tax=GWC2_Deltaproteobacteria_65_14_curated
hypothetical protein
13_1_40cm_4_scaffold_223_17
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

17139..17750
DNA (612bp) protein (204aa)
methyltransferase n=1 Tax=Nocardiopsis chromatogenes RepID=UPI000348B16F
methyltransferase Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
type 11 methyltransferase
13_1_40cm_4_scaffold_223_18
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17818..18345
DNA (528bp) protein (176aa)
Response regulator receiver protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WMS9_GEOS8
response regulator receiver protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
response regulator receiver protein
13_1_40cm_4_scaffold_223_19
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18547..20940)
DNA (2394bp) protein (798aa)
copF; cation-transporting ATPase (EC:3.6.3.-)
Lead, cadmium, zinc and mercury transporting ATPase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PPG2_9DELT
Copper ABC transporter ATPase {ECO:0000313|EMBL:KFA89789.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
13_1_40cm_4_scaffold_223_20
unknown

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comp(20937..21356)
DNA (420bp) protein (140aa)

This feature has no annotations

Displaying 20 items

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