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13_1_40cm_4_scaffold_384

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_384_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1..1527
DNA (1527bp) protein (509aa)
cyoB; Heme/copper-type cytochrome oxidase, subunit 1; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Cytochrome-c oxidase id=2731962 bin=GWC2_Ignavibacteria_56_12 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
cyoB; Heme/copper-type cytochrome oxidase, subunit 1
13_1_40cm_4_scaffold_384_2
RLO_PLX_64_10, Bacteria

Not on your lists

1529..2425
DNA (897bp) protein (299aa)
cytochrome oxidase subunit III n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3812F
Cytochrome c oxidase, subunit III Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cyoC; Heme/copper-type cytochrome oxidase, subunit 3
13_1_40cm_4_scaffold_384_3
RLO_PLX_64_10, Bacteria

Not on your lists

2426..2632
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B654B6
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_1_40cm_4_scaffold_384_4
GWA2_OP3_50_21_curated, Omnitrophica, Bacteria

Not on your lists

2632..2820
DNA (189bp) protein (63aa)
hypothetical protein Tax=GWA2_OP3_50_21_curated
13_1_40cm_4_scaffold_384_5
Thermosynechococcus sp. NK55a, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2756..3835)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034C7013
SAM-dependent methyltransferase UbiE/COQ5 family
SAM-dependent methyltransferase UbiE/COQ5 family {ECO:0000313|EMBL:AHB87824.1}; TaxID=1394889 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="The
13_1_40cm_4_scaffold_384_6
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3887..4621
DNA (735bp) protein (245aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=926566 specie
NAD-dependent protein deacylase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEE8_TERRK
NAD-dependent protein deacetylase, SIR2 family
13_1_40cm_4_scaffold_384_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4621..5796
DNA (1176bp) protein (392aa)
MOFRL domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7H1_ANADF
MOFRL domain-containing protein
MOFRL domain protein {ECO:0000313|EMBL:ABS24667.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" sour
13_1_40cm_4_scaffold_384_8
unknown

Not on your lists

5811..6365
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_4_scaffold_384_9
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6359..6811)
DNA (453bp) protein (151aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burk
Phosphodiesterase, MJ0936 family n=1 Tax=Burkholderia sp. YI23 RepID=G8M743_9BURK
phosphodiesterase, MJ0936 family
13_1_40cm_4_scaffold_384_10
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6833..7393
DNA (561bp) protein (187aa)
tRNA-(MS[2]IO[6]A)-hydroxylase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DCV0_MYXXD
miaE; tRNA-(MS[2]IO[6]A)-hydroxylase
tRNA-(MS[2]IO[6]A)-hydroxylase {ECO:0000313|EMBL:ABF92447.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="
13_1_40cm_4_scaffold_384_11
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7717..9729)
DNA (2013bp) protein (671aa)
ATP-dependent helicase HrpB n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEC4_ANASK
ATP-dependent helicase HrpB
ATP-dependent helicase HrpB {ECO:0000313|EMBL:KFE62056.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="
13_1_40cm_4_scaffold_384_12
unknown

Not on your lists

comp(9899..10003)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_4_scaffold_384_13
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10099..10884)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB22_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG71670.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_384_14
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10884..11678)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB21_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG71669.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_384_15
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11675..12550)
DNA (876bp) protein (292aa)
ABC transporter ATP-binding protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUL4_CORCM
natA1; ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFE09579.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;"
13_1_40cm_4_scaffold_384_16
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12685..14235)
DNA (1551bp) protein (517aa)
Methyl accepting chemotaxis protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U5D8_9DELT
methyl-accepting chemotaxis protein
Methyl accepting chemotaxis protein {ECO:0000313|EMBL:ERK90128.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" so
13_1_40cm_4_scaffold_384_17
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14244..15305)
DNA (1062bp) protein (354aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1406225 species="Bacteria; Proteobacteria; Delta
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJV8_MYXFH
putative protein-glutamate methylesterase CheB
13_1_40cm_4_scaffold_384_18
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15302..17491)
DNA (2190bp) protein (730aa)
Chemotaxis sensor histidine kinase/response regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UNB0_MYXSD
chemotaxis sensor histidine kinase/response regulator rbh
Chemotaxis sensor histidine kinase/response regulator {ECO:0000313|EMBL:AGC47929.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae
13_1_40cm_4_scaffold_384_19
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17491..18027)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJV6_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERK90131.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_4_scaffold_384_20
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18024..19202)
DNA (1179bp) protein (393aa)
Chemotaxis protein methyltransferase CheR n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9R805_9DELT
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:EPX65198.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystoba
frzF1; putative chemotaxis protein methyltransferase CheR
13_1_40cm_4_scaffold_384_21
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19199..20056)
DNA (858bp) protein (286aa)
Putative response regulator/chemotaxis protein CheW n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QV41_9DELT
Putative response regulator/chemotaxis protein CheW {ECO:0000313|EMBL:EPX65199.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteracea
putative response regulator/chemotaxis protein CheW
13_1_40cm_4_scaffold_384_22
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20053..20433)
DNA (381bp) protein (127aa)
Putative chemotaxis protein CheY n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUP2_CORCM
chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:AGC47933.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_4_scaffold_384_23
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(20521..21492)
DNA (972bp) protein (324aa)
Quinone oxidoreductase putative PIG3 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NID5_ROSCS
quinone oxidoreductase PIG3
Quinone oxidoreductase putative PIG3 {ECO:0000313|EMBL:ABU57235.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Ro
13_1_40cm_4_scaffold_384_24
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21522..22376
DNA (855bp) protein (285aa)
Periplasmic binding protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRG8_HALO1
Vitamin B12 ABC transporter, B12-binding component BtuF {ECO:0000313|EMBL:EYF01014.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae;
periplasmic binding protein
13_1_40cm_4_scaffold_384_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

22373..23776
DNA (1404bp) protein (468aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_384_26
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23877..25502)
DNA (1626bp) protein (542aa)
Signal recognition particle protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MSA5_CORCM
Signal recognition particle {ECO:0000313|EMBL:AKF82614.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="My
signal recognition particle protein
13_1_40cm_4_scaffold_384_27
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25549..26163
DNA (615bp) protein (205aa)
DedA n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ILZ0_ANADE
hypothetical protein
DedA {ECO:0000313|EMBL:ABC79823.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_384_trna_1
unknown

Not on your lists

comp(26188..26271)
DNA (84bp)
transferRNA
13_1_40cm_4_scaffold_384_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26375..29251
DNA (2877bp) protein (959aa)
2-oxoglutarate dehydrogenase E1 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y833_SORCE
2-oxoglutarate dehydrogenase E1
2-oxoglutarate dehydrogenase E1 {ECO:0000313|EMBL:AGP39038.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sor
13_1_40cm_4_scaffold_384_29
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(29255..29920)
DNA (666bp) protein (222aa)
GMP synthase-Glutamine amidotransferase domain (EC:6.3.5.2)
GMP synthase-Glutamine amidotransferase domain {ECO:0000313|EMBL:CCW36172.1}; EC=6.3.5.2 {ECO:0000313|EMBL:CCW36172.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomona
GMP synthase-Glutamine amidotransferase domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWL3_9BACT
Displaying items 1-30 of 50 in total

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