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13_1_40cm_4_scaffold_4446

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4446_1
unknown

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comp(3..110)
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

13_1_40cm_4_scaffold_4446_2
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(123..1343)
-----------------
DNA (1221bp)
protein (407aa)
GTP cyclohydrolase II (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ILH6_ANADE
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacteri
13_1_40cm_4_scaffold_4446_3
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1354..1986)
-----------------
DNA (633bp)
protein (211aa)
Riboflavin synthase, alpha subunit n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TZT7_DESML
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:KDQ66051.1}; TaxID=1487711 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.
riboflavin synthase subunit alpha
13_1_40cm_4_scaffold_4446_4
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2234..2746
-----------------
DNA (513bp)
protein (171aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5C2_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ79579.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;"
13_1_40cm_4_scaffold_4446_5
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2758..3720)
-----------------
DNA (963bp)
protein (321aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UIM5_ANASK
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
13_1_40cm_4_scaffold_4446_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3735..4208)
-----------------
DNA (474bp)
protein (158aa)
Transcriptional repressor NrdR n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C8A9_MYXFH
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; My
13_1_40cm_4_scaffold_4446_7
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4213..5478)
-----------------
DNA (1266bp)
protein (422aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAM
Serine hydroxymethyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=GLYA_ANADE
13_1_40cm_4_scaffold_4446_8
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5494..6738)
-----------------
DNA (1245bp)
protein (415aa)
beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RBG_16_Anaeromyxobacter_69_14_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JEX1_ANAD2
3-oxoacyl-(acyl-carrier-protein) synthase 2
13_1_40cm_4_scaffold_4446_9
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6748..6981)
-----------------
DNA (234bp)
protein (78aa)
Acyl carrier protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D342_MYXXD
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria
13_1_40cm_4_scaffold_4446_10
unknown

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comp(7070..7573)
-----------------
DNA (504bp)
protein (168aa)

This feature has no annotations

13_1_40cm_4_scaffold_4446_11
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7570..8523)
-----------------
DNA (954bp)
protein (318aa)
fabD; malonyl CoA-ACP transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TLV0_9DELT
ACP S-malonyltransferase {ECO:0000313|EMBL:AKF82554.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoc
13_1_40cm_4_scaffold_4446_12
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8528..9517)
-----------------
DNA (990bp)
protein (330aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08WK6_STIAD
13_1_40cm_4_scaffold_4446_13
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9572..10600)
-----------------
DNA (1029bp)
protein (343aa)
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Phosphate acyltransferase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=PLSX_ANADF
putative glycerol-3-phosphate acyltransferase PlsX
13_1_40cm_4_scaffold_4446_14
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10625..10807)
-----------------
DNA (183bp)
protein (61aa)
50S ribosomal protein L32 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ75_9FIRM
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RBG_13_Deltaproteobacteria_53_10_curated
rpmF; putative 50S ribosomal protein L32
13_1_40cm_4_scaffold_4446_15
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10808..11683)
-----------------
DNA (876bp)
protein (292aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDZ7_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS26943.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_4446_16
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11953..12162)
-----------------
DNA (210bp)
protein (70aa)
30S ribosomal protein S1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCQ7_ANADF
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RBG_16_Anaeromyxobacter_69_14_curated
rpsA; 30S ribosomal protein S1
Displaying 16 items

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