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13_1_40cm_4_scaffold_4854

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4854_1
unknown

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comp(2..172)
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

13_1_40cm_4_scaffold_4854_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(234..1865)
-----------------
DNA (1632bp)
protein (544aa)
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
diguanylate cyclase
13_1_40cm_4_scaffold_4854_3
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2164..2751
-----------------
DNA (588bp)
protein (196aa)
Response regulator n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DEY0_MYXXD
response regulator
Response regulator {ECO:0000313|EMBL:ABF89672.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus x
13_1_40cm_4_scaffold_4854_4
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2996..3601
-----------------
DNA (606bp)
protein (202aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EBBE74
Uncharacterized protein {ECO:0000313|EMBL:EKZ98932.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HM
hypothetical protein
13_1_40cm_4_scaffold_4854_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3693..4253
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GPB3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96729.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
13_1_40cm_4_scaffold_4854_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4327..4725)
-----------------
DNA (399bp)
protein (133aa)
Death-on-curing family protein id=4915814 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Death-on-curing family protein Tax=GWC2_Rokubacteria_70_16_curated
Death-on-curing family protein
13_1_40cm_4_scaffold_4854_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4722..4949)
-----------------
DNA (228bp)
protein (76aa)
Putative uncharacterized protein id=4226138 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_4_scaffold_4854_8
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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comp(5029..6609)
-----------------
DNA (1581bp)
protein (527aa)
Glycosyl transferase n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RFC6_9RHOO
serine/threonin protein kinase Tax=RBG_16_Zixibacteria_43_9_curated
conserved protein of unknown function, containing Tetratricopeptide repeat
13_1_40cm_4_scaffold_4854_9
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6809..7822)
-----------------
DNA (1014bp)
protein (338aa)
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase (EC:1.1.1.18)
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase {ECO:0000313|EMBL:AJQ26773.1}; EC=1.1.1.18 {ECO:0000313|EMBL:AJQ26773.1};; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenom
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase n=1 Tax=Pelosinus fermentans JBW45 RepID=I9DKW5_9FIRM
13_1_40cm_4_scaffold_4854_10
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(7863..8684)
-----------------
DNA (822bp)
protein (274aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R0Z6_SPISS
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADK80245.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae
Displaying 10 items

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