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13_1_40cm_4_scaffold_5417

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5417_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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1..480
DNA (480bp) protein (160aa)
ligC; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_RIF_CHLX_72_14_curated
ATP dependent DNA ligase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHM0_ANADF
ligC; ATP-dependent DNA ligase
13_1_40cm_4_scaffold_5417_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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504..1508
DNA (1005bp) protein (335aa)
DNA primase small subunit Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
DNA primase small subunit id=4718007 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
DNA primase small subunit
13_1_40cm_4_scaffold_5417_3
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1528..3825)
DNA (2298bp) protein (766aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SUI4_9DELT
ATP-dependent protease La
13_1_40cm_4_scaffold_5417_4
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4214..4519
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECZ4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82556.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
phosphoglycolate phosphatase
13_1_40cm_4_scaffold_5417_5
unknown

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comp(4524..4745)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_5417_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4914..6317)
DNA (1404bp) protein (468aa)
Proton/peptide symporter family protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08PT6_STIAD
Major facilitator transporter {ECO:0000313|EMBL:KFA90147.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
proton/peptide symporter family protein
13_1_40cm_4_scaffold_5417_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6416..7252
DNA (837bp) protein (279aa)
ATPase associated with various cellular activities, AAA_5 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q094M3_STIAD
ATPase, AAA family {ECO:0000313|EMBL:AKF06388.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus
ATPase
13_1_40cm_4_scaffold_5417_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7255..8436
DNA (1182bp) protein (394aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GNZ6_SORC5
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CAN96683.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;
13_1_40cm_4_scaffold_5417_9
unknown

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comp(8775..9212)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_4_scaffold_5417_10
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9209..10618)
DNA (1410bp) protein (470aa)
M20 family peptidase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N191_CORCM
Peptidase M20 {ECO:0000313|EMBL:KFA86796.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
dapE1; M20 family peptidase
13_1_40cm_4_scaffold_5417_11
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10664..11452
DNA (789bp) protein (263aa)
rhomboid family protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
Rhomboid family membrane protein id=2306563 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rhomboid family protein
13_1_40cm_4_scaffold_5417_12
unknown

Not on your lists

11650..12597
DNA (948bp) protein (316aa)

This feature has no annotations

Displaying 12 items

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