ggKbase home page

13_1_40cm_4_scaffold_5641

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5641_1
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(297..1322)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003775656
hypothetical protein Tax=GWA2_Ignavibacteria_54_16_curated
hypothetical protein
13_1_40cm_4_scaffold_5641_2
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(1393..2394)
DNA (1002bp) protein (334aa)
acetate kinase; K00925 acetate kinase [EC:2.7.2.1] Tax=RBG_16_Spirochaetes_49_21_curated
Acetate kinase n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YRQ2_9CHLB
acetate kinase
13_1_40cm_4_scaffold_5641_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2391..4745)
DNA (2355bp) protein (785aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacte
phosphoketolase (EC:4.1.2.9)
Probable phosphoketolase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TU52_9CHLR
13_1_40cm_4_scaffold_5641_4
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4839..5948
DNA (1110bp) protein (370aa)
Ribosome-binding ATPase YchF n=2 Tax=Anaeromyxobacter RepID=B4UJU4_ANASK
GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxoba
13_1_40cm_4_scaffold_5641_5
unknown

Not on your lists

comp(5955..6458)
DNA (504bp) protein (168aa)
OmpA/MotB domain protein
13_1_40cm_4_scaffold_5641_6
unknown

Not on your lists

6706..7380
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_40cm_4_scaffold_5641_7
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

7876..8856
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1Y848_9DELT
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
curli production assembly/transport component CsgG
13_1_40cm_4_scaffold_5641_8
unknown

Not on your lists

8846..9925
DNA (1080bp) protein (360aa)

This feature has no annotations

13_1_40cm_4_scaffold_5641_9
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9971..10540
DNA (570bp) protein (190aa)
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
Putative uncharacterized protein id=1843495 bin=GWA2_Elusimicrobia_66_18 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
13_1_40cm_4_scaffold_5641_10
unknown

Not on your lists

10636..11580
DNA (945bp) protein (315aa)

This feature has no annotations

13_1_40cm_4_scaffold_5641_11
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11585..12541)
DNA (957bp) protein (319aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JCT8_ANAD2
13_1_40cm_4_scaffold_5641_12
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12541..13494)
DNA (954bp) protein (318aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RBG_16_Anaeromyxobacter_69_14_curated
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U0U4_MYXSD
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_40cm_4_scaffold_5641_13
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13523..13786)
DNA (264bp) protein (88aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterine
Putative foldase protein PrsA n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C8P1_MYXFH
putative foldase protein PrsA
13_1_40cm_4_scaffold_5641_14
unknown

Not on your lists

14020..14430
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_5641_15
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14529..15563)
DNA (1035bp) protein (345aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterine
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIW1_ANADF
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_40cm_4_scaffold_5641_16
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15654..16223)
DNA (570bp) protein (190aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=290397 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IHN6_ANADE
transcription-repair coupling factor
Displaying 16 items

View Taxonomy