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13_1_40cm_4_scaffold_601

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_601_1
unknown

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comp(3..89)
DNA (87bp) protein (29aa)

This feature has no annotations

13_1_40cm_4_scaffold_601_2
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(319..1239)
DNA (921bp) protein (307aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JA37_ANAD2
Putative ECF RNA polymerase sigma factor SigI {ECO:0000313|EMBL:GAO02563.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_4_scaffold_601_3
unknown

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comp(1290..1754)
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_4_scaffold_601_4
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1870..2298
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Paenibacillus mucilaginosus RepID=F8FF90_PAEMK
Uncharacterized protein {ECO:0000313|EMBL:AKF87233.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
13_1_40cm_4_scaffold_601_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2423..3946
DNA (1524bp) protein (508aa)
Phospholipase C {ECO:0000313|EMBL:EFH81439.1}; EC=3.1.4.3 {ECO:0000313|EMBL:EFH81439.1};; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobac
phospholipase C (EC:3.1.4.3)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036F2454
13_1_40cm_4_scaffold_601_6
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4083..4538)
DNA (456bp) protein (152aa)
sulfate transporter Tax=CG_Ignavi_01
Cyclic nucleotide-binding:Sulfate transporter/antisigma-factor antagonist STAS:Xanthine/uracil/vitamin C permease:Sulphate transporter id=1718552 bin=GWA2_Elusimicrobia_66_18 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
13_1_40cm_4_scaffold_601_7
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4830..5468)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LDL8_RALME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF11758.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidu
13_1_40cm_4_scaffold_601_8
unknown

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5515..5829
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_4_scaffold_601_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6155..6427
DNA (273bp) protein (91aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4N5_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL94426.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
TetR family transcriptional regulator
13_1_40cm_4_scaffold_601_10
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6502..7950
DNA (1449bp) protein (483aa)
Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMY4_ANADE
peptidase S1 and S6, chymotrypsin/Hap
Peptidase S1 and S6, chymotrypsin/Hap {ECO:0000313|EMBL:ABC80162.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxob
13_1_40cm_4_scaffold_601_11
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8000..9169
DNA (1170bp) protein (390aa)
MFS transporter n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNU1_SORCE
MFS transporter {ECO:0000313|EMBL:AKF79033.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus ful
MFS transporter
13_1_40cm_4_scaffold_601_12

Not on your lists

comp(9205..11286)
DNA (2082bp) protein (694aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.
Glycosyl hydrolase (Glycogen debranching enzyme) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGT4_AZOBR
glycogen debranching protein
13_1_40cm_4_scaffold_601_13

Not on your lists

comp(11300..13375)
DNA (2076bp) protein (692aa)
transketolase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003761A23
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49093.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transketolase
13_1_40cm_4_scaffold_601_14

Not on your lists

comp(13372..14751)
DNA (1380bp) protein (460aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V465_TERSS
13_1_40cm_4_scaffold_601_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14748..15791)
DNA (1044bp) protein (348aa)
6-phosphogluconate dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003827202
6-phosphogluconate dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
6-phosphogluconate dehydrogenase
13_1_40cm_4_scaffold_601_16

Not on your lists

comp(15794..16669)
DNA (876bp) protein (292aa)
Fructose-bisphosphate aldolase class 1 {ECO:0000256|HAMAP-Rule:MF_00729}; EC=4.1.2.13 {ECO:0000256|HAMAP-Rule:MF_00729};; Fructose-bisphosphate aldolase class I {ECO:0000256|HAMAP-Rule:MF_00729}; TaxI
Fructose-bisphosphate aldolase class I (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A1Q8_9PLAN
13_1_40cm_4_scaffold_601_17
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16666..17034)
DNA (369bp) protein (123aa)
glucose-6-phosphate isomerase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000366B263
glucose-6-phosphate isomerase Tax=RBG_13_Bacteroidetes_42_15_curated
glucose-6-phosphate isomerase
Displaying 17 items

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