ggKbase home page

13_1_40cm_4_scaffold_621

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_621_1
unknown

Not on your lists

2..133
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_2
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

739..1608
DNA (870bp) protein (290aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRM3_ACCPU
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACV34512.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumuliba
13_1_40cm_4_scaffold_621_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1813..3726)
DNA (1914bp) protein (638aa)
Heavy metal translocating P-type ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU76_ALIDB
heavy metal translocating p-type atpase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ADV00481.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
13_1_40cm_4_scaffold_621_4
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3737..4006)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Spongiibacter tropicus RepID=UPI0003B62D86
Uncharacterized protein {ECO:0000313|EMBL:KEZ76656.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera
hypothetical protein
13_1_40cm_4_scaffold_621_5
Parvularcula bermudensis, Parvularcula, Parvularculales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4512..4772
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TDL1_PARBH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADM08766.1}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula berm
13_1_40cm_4_scaffold_621_6
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5186..5812)
DNA (627bp) protein (209aa)
TetR family transcriptional regulator n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5X079_MYCKA
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AGZ54582.1}; TaxID=557599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasi
13_1_40cm_4_scaffold_621_7
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5941..6870
DNA (930bp) protein (310aa)
NmrA family transcriptional regulator n=1 Tax=Salinispora tropica RepID=UPI00035C2F31
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ABP54642.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-91
13_1_40cm_4_scaffold_621_8
unknown

Not on your lists

6997..7368
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_9
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7635..7949)
DNA (315bp) protein (105aa)
Putative uncharacterized protein id=3024484 bin=GWC2_Pelobacter_58_13 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWC2_Pelobacteraceae_58_13_curated
hypothetical protein
13_1_40cm_4_scaffold_621_10
Trypanosoma cruzi, Trypanosoma, Kinetoplastida, Eukaryota

Not on your lists

8045..8875
DNA (831bp) protein (277aa)
Mucin-associated surface protein (MASP), putative n=1 Tax=Trypanosoma cruzi (strain CL Brener) RepID=Q4DQS6_TRYCC
Mucin-associated surface protein (MASP), putative {ECO:0000313|EMBL:EAN94871.1}; TaxID=353153 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum.;" source="T
hypothetical protein
13_1_40cm_4_scaffold_621_11
unknown

Not on your lists

8917..9201
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_12
unknown

Not on your lists

comp(9224..9589)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_13
unknown

Not on your lists

9871..10023
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_14
unknown

Not on your lists

10506..10655
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_15
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11309..13447
DNA (2139bp) protein (713aa)
Di-heme cytochrome c peroxidase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVK5_HALH1
Di-heme cytochrome c peroxidase
Di-heme cytochrome c peroxidase {ECO:0000313|EMBL:AEE52462.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Halisco
13_1_40cm_4_scaffold_621_16
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13593..19064
DNA (5472bp) protein (1824aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000345A579
putative PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ADN13382.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 782
13_1_40cm_4_scaffold_621_17
unknown

Not on your lists

19233..19493
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_18
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19490..20140
DNA (651bp) protein (217aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF7_ANADF
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABS27803.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteracea
13_1_40cm_4_scaffold_621_19
unknown

Not on your lists

20192..20338
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_20
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

20411..20683
DNA (273bp) protein (91aa)
alkyl hydroperoxide reductase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=3879298 bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peroxiredoxin
13_1_40cm_4_scaffold_621_21

Not on your lists

20949..21779
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037B3940
Marine sediment metagenome DNA, contig: S01H1_S01584 {ECO:0000313|EMBL:GAF86697.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
type 11 methyltransferase
13_1_40cm_4_scaffold_621_22

Not on your lists

comp(22100..22831)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XW60_SORCE
Marine sediment metagenome DNA, contig: S12H4_L01837 {ECO:0000313|EMBL:GAI76663.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_40cm_4_scaffold_621_23
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(22828..23295)
DNA (468bp) protein (156aa)
Peptidase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVE9_SORCE
proteinase inhibitor I4 serpin; K13963 serpin B Tax=RBG_16_Actinobacteria_70_17_curated
peptidase
13_1_40cm_4_scaffold_621_24
unknown

Not on your lists

23874..24377
DNA (504bp) protein (168aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_25
unknown

Not on your lists

24661..24819
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_26
unknown

Not on your lists

comp(24830..25222)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_27
unknown

Not on your lists

25436..25570
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_28
unknown

Not on your lists

comp(25621..25716)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_29
unknown

Not on your lists

comp(25706..25873)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_621_30
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26101..26793
DNA (693bp) protein (231aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Rhizobium sp. CF122 RepID=J2R6X3_9RHIZ
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EJL48377.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
glyoxalase/bleomycin resistance protein/dioxygenase
Displaying items 1-30 of 35 in total

View Taxonomy