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13_1_40cm_4_scaffold_7468

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7468_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..265)
DNA (264bp) protein (88aa)
M20 (Carboxypeptidase Ss1) subfamily protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX46_CORCM
Peptidase M20 {ECO:0000313|EMBL:KFA90129.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
yhaA; M20 (carboxypeptidase Ss1) subfamily protein
13_1_40cm_4_scaffold_7468_2
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

633..1235
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B57C2B
YVTN beta-propeller repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
YVTN beta-propeller repeat-containing protein
13_1_40cm_4_scaffold_7468_3
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1506..2465
DNA (960bp) protein (320aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16)
CoA transferase n=1 Tax=Saccharopolyspora erythraea RepID=UPI0001D313CF
CoA transferase {ECO:0000313|EMBL:EQD85485.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
13_1_40cm_4_scaffold_7468_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2462..3241
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJB96615.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJB96615.1};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae
Enoyl-CoA hydratase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DN61_BRAJP
enoyl-CoA hydratase
13_1_40cm_4_scaffold_7468_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3250..4434
DNA (1185bp) protein (395aa)
sgaA; Serine-glyoxylate aminotransferase (EC:2.6.1.45)
serine--glyoxylate aminotransferase n=1 Tax=Amycolatopsis nigrescens RepID=UPI000369D209
Serine--glyoxylate aminotransferase {ECO:0000313|EMBL:EWY37241.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Ske
13_1_40cm_4_scaffold_7468_6
unknown

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4538..4660
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_4_scaffold_7468_7
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4661..5062)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Frankia sp. EUN1f RepID=D3D5G5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC81852.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
13_1_40cm_4_scaffold_7468_8
unknown

Not on your lists

5307..5468
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_4_scaffold_7468_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5493..6779)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5G7_9PROT
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_1_40cm_4_scaffold_7468_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6779..7306)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXL2_9RHIZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
dctQ1; TRAP dicarboxylate transporter subunit DctQ
13_1_40cm_4_scaffold_7468_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7303..8289)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JUH2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE78127.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
hypothetical protein
13_1_40cm_4_scaffold_7468_12
unknown

Not on your lists

comp(8418..8819)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_4_scaffold_7468_13
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9057..10037
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXN8_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE07044.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
13_1_40cm_4_scaffold_7468_14
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10120..11199
DNA (1080bp) protein (360aa)
Two-component sensor histidine kinase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FWE9_STIAD
two-component sensor histidine kinase
Two-component sensor histidine kinase {ECO:0000313|EMBL:ADO76055.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.
13_1_40cm_4_scaffold_7468_15
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11196..11951
DNA (756bp) protein (252aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FWF0_STIAD
LyTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADO76056.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacterace
Displaying 15 items

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