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13_1_40cm_4_scaffold_2508_10

Organism: 13_1_40CM_4_Deltaproteobacteria_68_19

partial RP 40 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 7 / 38
Location: 8357..9805

Top 3 Functional Annotations

Value Algorithm Source
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TKD2_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 474.0
  • Bit_score: 455
  • Evalue 7.00e-125
outer membrane secretin family protein similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 474.0
  • Bit_score: 455
  • Evalue 2.60e-125
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly {ECO:0000313|EMBL:ERK85604.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 474.0
  • Bit_score: 455
  • Evalue 9.80e-125

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Taxonomy

Myxococcus sp. (contaminant ex DSM 436) → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1449
ATGCGACGACTGCCCATCTTCACCCTGCTCTTCGCCGCGGCCGGCGCCGGGCAACCCGAAGGCGCCCTCATCACGCTCGGCGTCGGCCAGCAGAAAGTGATCCAGCTCGACAACGTGGCCCGCGTCGCCATCGGGGAGCCGGAGATCGCCGACGTCAAACAGGTCGGCGGCGGAGGTGAGCTGCTGATCACCGGCGTCGGCGAGGGCCGCACCTCCTTGCTCGTCTGGCGCACCAACGGTTCCCGCCTCGGCTACCTGGTCGTCGTCCGCAGACAGGATCCCAGGGAGTTGATGATCGAAGTTCGCGCGCTGCTCGGCGAGCGCGAGGGGATCCATGTCCGGGTGGTCGGCGACCGGGTGGTCCTCGAGGGAGAGACGCTCACCGGCGACGACTACGAGCGCGTCCAACAGATCACCCAGCTCTATCCGCAAGTGACGTCCTTCGTCCGCCCCAGCGGGAACGCGCGCAGGCTCGCCGCCGAGGCGCTGAACCGGGCGCTGCAACGGCACGGATTTCGCGGCGTATCCGCCGGCGTTCTCGGGAACACGCTGGTGCTCGAAGGCTCCGTGGAGTCGAAGGACGACCTCCGCAAGCTCGATCTGATCGCGCGCGCCGCCGCGGAGAAGGCGGAAAACCTCGTCACGGTGGGCATGAAGAAGATGATCCTGGTGGAGGTGGATTTCGTGGAGGCGAGCTCCGGCAGCACCAGGGCGGTCGGGATCAAACCGCCCGCGGCGCTGGTGTCCGCTGGAGAGGGAGCGACGGCGAGCGTCTCCATCATCCAGCCCATCGCCGGCCTCGACTCCGGGCAGACGCAGAAATCGGCGAGCGTGAGCGTGAGCGCCTCCGCGGCGACGGACTTCTCGGCGGCAGCGCGGTTCGACAACGGAGCCGTCCGGGTGCTGAGCCAGCCACGGCTCGTCTGCGCCAGCGGCGAGAAGGCGCAGTTCGTCGCCGGCGGCGAGATCCCGATCGTCATGGTCACGCAGAGCCAGTCGTCGGTGGAATTCAAGAAGTTCGGCATCCTGCTCGACATCACGCCCACCGCCGACAGGAGCGGCAACATCGCGGCCGAGATCCATGCCGAGGTGAGCGACGTCGACCGGAGCATCGCCGTCCGCGCCAACGGCTTCGACATGCCGGGGCTGCGCGTCCGGGACGTGAAGACCAGCGTGACCGTCAAAGACGGGGAGACCATCGTCCTCAGCGGGCTGTTCAACTACAGCGAGGACAAGGAAGTCTCGAAGGTGCCGCTGCTGGGGCACATCCCCATCCTCGGCGAGCTGTTCAAGAGCCGCAGCTTCGTCGAGCGCAAGACCGGGCTCGCCATCTACGTGACTCCGCGGATGATCTCGCCCGGGACGGAGAAGGCGAACGAGCTGATCGACGGAGCGCGCAAGCTGTACAAGGACGCCGAGGACTCGGTGTCATTCTCGGTGTTTGATTAG
PROTEIN sequence
Length: 483
MRRLPIFTLLFAAAGAGQPEGALITLGVGQQKVIQLDNVARVAIGEPEIADVKQVGGGGELLITGVGEGRTSLLVWRTNGSRLGYLVVVRRQDPRELMIEVRALLGEREGIHVRVVGDRVVLEGETLTGDDYERVQQITQLYPQVTSFVRPSGNARRLAAEALNRALQRHGFRGVSAGVLGNTLVLEGSVESKDDLRKLDLIARAAAEKAENLVTVGMKKMILVEVDFVEASSGSTRAVGIKPPAALVSAGEGATASVSIIQPIAGLDSGQTQKSASVSVSASAATDFSAAARFDNGAVRVLSQPRLVCASGEKAQFVAGGEIPIVMVTQSQSSVEFKKFGILLDITPTADRSGNIAAEIHAEVSDVDRSIAVRANGFDMPGLRVRDVKTSVTVKDGETIVLSGLFNYSEDKEVSKVPLLGHIPILGELFKSRSFVERKTGLAIYVTPRMISPGTEKANELIDGARKLYKDAEDSVSFSVFD*