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13_1_40cm_4_scaffold_2508

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2508_1
unknown

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1..183
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_4_scaffold_2508_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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236..1237
DNA (1002bp) protein (334aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
Glycyl-tRNA synthetase, alpha subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HD65_ANADF
glyQ; glycyl-tRNA synthetase subunit alpha
13_1_40cm_4_scaffold_2508_3
unknown

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comp(1286..1450)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_4_scaffold_2508_4
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2378..3268
DNA (891bp) protein (297aa)
Glycine--tRNA ligase beta subunit n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UA10_MYXSD
Glycyl-tRNA synthetase subunit beta {ECO:0000313|EMBL:AKF81295.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" so
glycyl-tRNA synthetase subunit beta
13_1_40cm_4_scaffold_2508_5
unknown

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3304..4710
DNA (1407bp) protein (469aa)

This feature has no annotations

13_1_40cm_4_scaffold_2508_6
unknown

Not on your lists

comp(5219..5986)
DNA (768bp) protein (256aa)

This feature has no annotations

13_1_40cm_4_scaffold_2508_7
unknown

Not on your lists

6206..6970
DNA (765bp) protein (255aa)

This feature has no annotations

13_1_40cm_4_scaffold_2508_8
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7026..7799
DNA (774bp) protein (258aa)
FHA domain-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7J9_MYXSD
FHA domain-containing protein
FHA domain-containing protein {ECO:0000313|EMBL:AGC44881.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="
13_1_40cm_4_scaffold_2508_9
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7818..8312
DNA (495bp) protein (165aa)
Flp pilus assembly protein, protease CpaA n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FGI6_9DELT
Flp pilus assembly protein, protease CpaA {ECO:0000313|EMBL:EKO37712.1}; Flags: Precursor;; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionacea
hypothetical protein
13_1_40cm_4_scaffold_2508_10
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8357..9805
DNA (1449bp) protein (483aa)
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TKD2_9DELT
outer membrane secretin family protein
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly {ECO:0000313|EMBL:ERK85604.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy
13_1_40cm_4_scaffold_2508_11
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9993..11774
DNA (1782bp) protein (594aa)
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NUF1_9DELT
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily protein {ECO:0000313|EMBL:KFE70822.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cys
type II/IV secretion system protein
13_1_40cm_4_scaffold_2508_12
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11787..14471
DNA (2685bp) protein (895aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystob
DNA polymerase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FFI6_STIAD
13_1_40cm_4_scaffold_2508_13
unknown

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comp(14512..15366)
DNA (855bp) protein (285aa)

This feature has no annotations

13_1_40cm_4_scaffold_2508_14
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15419..16357)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C732_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI68153.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
13_1_40cm_4_scaffold_2508_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16354..17412)
DNA (1059bp) protein (353aa)
Reductase, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29394_ARCFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYF06714.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
13_1_40cm_4_scaffold_2508_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17409..18509)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000376088F
FAD linked oxidase Tax=CG_Rhodocyc_01
FAD linked oxidase
13_1_40cm_4_scaffold_2508_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18506..20077)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YH08_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42168.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_4_scaffold_2508_18
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20124..20291)
DNA (168bp) protein (56aa)
Aspartyl-tRNA synthase {ECO:0000313|EMBL:AKF82476.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AKF82476.1};; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae;
Aspartate--tRNA ligase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UC28_MYXSD
aspartyl-tRNA synthetase
13_1_40cm_4_scaffold_2508_19
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20240..21919)
DNA (1680bp) protein (560aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|
Aspartate--tRNA ligase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=SYD_ANADE
13_1_40cm_4_scaffold_2508_20
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22276..23904)
DNA (1629bp) protein (543aa)
Protein-export membrane protein SecF n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UID7_ANASK
protein-export membrane protein SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anae
13_1_40cm_4_scaffold_2508_21
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23993..24148)
DNA (156bp) protein (52aa)
Protein translocase subunit SecD n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C740_MYXFH
protein-export membrane protein SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromy
Displaying 21 items

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