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13_1_40cm_4_scaffold_123

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_123_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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365..820
DNA (456bp) protein (152aa)
hypothetical protein id=14427869 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_123_2

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comp(812..1321)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI000373E265
Uncharacterized protein {ECO:0000313|EMBL:AIF15818.1}; TaxID=1456258 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_71_E12.;"
hypothetical protein
13_1_40cm_4_scaffold_123_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1367..1717)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATF3_9ARCH
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_123_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1701..1937)
DNA (237bp) protein (79aa)
AsnC/Lrp family regulatory protein id=14427863 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
AsnC/Lrp family regulatory protein Tax=CSP1_1_Thaumarchaeota
transcriptional regulator, AsnC family
13_1_40cm_4_scaffold_123_trna_2
unknown

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comp(1985..2059)
DNA (75bp)
transferRNA
13_1_40cm_4_scaffold_123_5
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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2132..2686
DNA (555bp) protein (185aa)
Transcriptional regulator n=1 Tax=uncultured marine crenarchaeote SAT1000-23-F7 RepID=B3V5D7_9ARCH
cupin domain protein
Cupin domain protein {ECO:0000313|EMBL:AJA92676.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
13_1_40cm_4_scaffold_123_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2701..3546)
DNA (846bp) protein (282aa)
Putative methyltransferase type 11 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG42_NITGG
methyltransferase type 11
Putative methyltransferase type 11 {ECO:0000313|EMBL:AFU58755.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitr
13_1_40cm_4_scaffold_123_7

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3601..3861
DNA (261bp) protein (87aa)
Phosphoribosylformylglycinamidine synthase PurS (PurL) {ECO:0000313|EMBL:AIF16305.1}; EC=6.3.5.3 {ECO:0000313|EMBL:AIF16305.1};; TaxID=1456267 species="Archaea; Thaumarchaeota; environmental samples.;
purS; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Uncharacterized protein n=1 Tax=uncultured marine crenarchaeote AD1000-207-H3 RepID=B3V6D1_9ARCH
13_1_40cm_4_scaffold_123_8

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comp(3881..4294)
DNA (414bp) protein (138aa)
hypothetical protein n=2 Tax=cellular organisms RepID=UPI0003757CF2
Signal transduction protein {ECO:0000313|EMBL:AIF24766.1}; TaxID=1456408 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_40_A08.;"
signal transduction protein
13_1_40cm_4_scaffold_123_9

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4390..5937
DNA (1548bp) protein (516aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF23452.1}; TaxID=1456386 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_15_H02.;"
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
13_1_40cm_4_scaffold_123_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6141..6821
DNA (681bp) protein (227aa)
purQ; Phosphoribosylformylglycinamidine synthase 1 (EC:6.3.5.3)
phosphoribosylformylglycinamidine synthase I id=14428171 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
phosphoribosylformylglycinamidine synthase I Tax=CSP1_1_Thaumarchaeota
13_1_40cm_4_scaffold_123_11
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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6818..8983
DNA (2166bp) protein (722aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E607_9ARCH
phosphoribosylformylglycinamidine synthase II
13_1_40cm_4_scaffold_123_12
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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8976..10412
DNA (1437bp) protein (479aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidot
Amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASI2_9ARCH
13_1_40cm_4_scaffold_123_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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10459..10659
DNA (201bp) protein (67aa)
Transcriptional regulator n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASM9_9ARCH
Transcriptional regulator {ECO:0000313|EMBL:CDI05545.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
AsnC family transcriptional regulator
13_1_40cm_4_scaffold_123_14
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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10690..11061
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASC6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05547.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_123_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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11104..11931
DNA (828bp) protein (276aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=14
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASI8_9ARCH
phosphoribosylaminoimidazolesuccinocarboxamide synthase
13_1_40cm_4_scaffold_123_16
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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12247..12783
DNA (537bp) protein (179aa)
Transcriptional regulator, ArsR family n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWI0_9ARCH
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EGP93632.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candida
ArsR family transcriptional regulator
13_1_40cm_4_scaffold_123_17
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(12787..13203)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS53_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05551.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_123_18
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13256..13993
DNA (738bp) protein (246aa)
proteasome endopeptidase complex, archaeal, alpha subunit (EC:3.4.25.1)
Proteasome endopeptidase complex, archaeal, alpha subunit {ECO:0000313|EMBL:AIF83899.1}; EC=3.4.25.1 {ECO:0000313|EMBL:AIF83899.1};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Ni
proteasome subunit alpha (EC:3.4.25.1) id=14428183 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_123_19
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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14034..14849
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0Y4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EIJ65377.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus salaria B
hypothetical protein
13_1_40cm_4_scaffold_123_20
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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15065..16057
DNA (993bp) protein (331aa)
50S ribosomal protein L3P n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASN7_9ARCH
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
rpl3p; 50S ribosomal protein L3P
13_1_40cm_4_scaffold_123_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16054..16869
DNA (816bp) protein (272aa)
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e id=14428187 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e Tax=CSP1_1_Thaumarchaeota
rpl4lp; 50S ribosomal protein L4P
13_1_40cm_4_scaffold_123_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16866..17132
DNA (267bp) protein (89aa)
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 id=14428188 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 Tax=CSP1_1_Thaumarchaeota
rpl23p; 50S ribosomal protein L23P
13_1_40cm_4_scaffold_123_23
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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17174..17569
DNA (396bp) protein (132aa)
30S ribosomal protein S19P n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KIT7_9ARCH
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitro
rps19p; 30S ribosomal protein S19
13_1_40cm_4_scaffold_123_24

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17575..18030
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL89610.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=14428190 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rpl22p; 50S ribosomal protein L22P
13_1_40cm_4_scaffold_123_25
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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18032..18796
DNA (765bp) protein (255aa)
30S ribosomal protein S3 n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3U9_9ARCH
rps; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309, ECO:0000313|EMBL:AJM92629.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="
13_1_40cm_4_scaffold_123_26
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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18796..18999
DNA (204bp) protein (68aa)
ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=14428192 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=CSP1_1_Thaumarchaeota
50S ribosomal protein L29
13_1_40cm_4_scaffold_123_27
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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18996..19262
DNA (267bp) protein (89aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P protein component 1 n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E5K7_9ARCH
ribonuclease P
13_1_40cm_4_scaffold_123_28
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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19259..19582
DNA (324bp) protein (108aa)
30S ribosomal protein S17 id=14428194 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
30S ribosomal protein S17 Tax=CSP1_1_Thaumarchaeota
rps17p; 30S ribosomal protein S17p
13_1_40cm_4_scaffold_123_29
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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19582..20019
DNA (438bp) protein (146aa)
50S ribosomal protein L14P n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASK4_9ARCH
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
50S ribosomal protein L14
Displaying items 1-30 of 41 in total

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