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13_1_40cm_4_scaffold_1427

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1427_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2..268)
DNA (267bp) protein (89aa)
heat shock protein HSP20 id=14428087 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
heat shock protein HSP20 Tax=CSP1_1_Thaumarchaeota
Heat shock protein HSP20
13_1_40cm_4_scaffold_1427_2
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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370..1047
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E2Y8_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJM91486.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.
13_1_40cm_4_scaffold_1427_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(1073..1393)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVW7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06699.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_1427_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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1521..2876
DNA (1356bp) protein (452aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVU4_9ARCH
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CDI06700.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeo
13_1_40cm_4_scaffold_1427_5
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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2870..3571
DNA (702bp) protein (234aa)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUU9_9ARCH
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit {ECO:0000313|EMBL:EGP94653.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitr
Precorrin-6y C5,15-methyltransferase subunit CbiE
13_1_40cm_4_scaffold_1427_6
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3575..4867)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0BBJ5_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPA04269.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
13_1_40cm_4_scaffold_1427_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4925..5659)
DNA (735bp) protein (245aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16328.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
hypothetical protein id=14427647 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_1427_8
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5696..6232)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E3A3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA06247.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
conserved membrane protein of unknown function
13_1_40cm_4_scaffold_1427_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6312..7742
DNA (1431bp) protein (477aa)
DNA polymerase II small subunit (EC:2.7.7.7) id=14428099 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DNA polymerase II small subunit (EC:2.7.7.7) Tax=CSP1_1_Thaumarchaeota
Nucleic acid-binding domain protein
13_1_40cm_4_scaffold_1427_10
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7744..9006)
DNA (1263bp) protein (421aa)
ORC1-type DNA replication protein n=3 Tax=Candidatus Nitrosoarchaeum RepID=F3KM00_9ARCH
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatu
cdc; ORC1-type DNA replication protein
13_1_40cm_4_scaffold_1427_11
unknown

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9247..9396
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_4_scaffold_1427_12
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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9556..9948
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVL9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06636.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_1427_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(10210..10800)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVQ5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06634.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_1427_14

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11319..12068
DNA (750bp) protein (250aa)
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUU0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM02371.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
geranylgeranylglyceryl phosphate synthase
13_1_40cm_4_scaffold_1427_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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12071..15445
DNA (3375bp) protein (1125aa)
DNA polymerase II large subunit (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] id=14428106 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DNA polymerase II large subunit (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] Tax=CSP1_1_Thaumarchaeota
DNA polymerase II large subunit (EC:2.7.7.7)
13_1_40cm_4_scaffold_1427_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(15442..16860)
DNA (1419bp) protein (473aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.- {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVN1_9ARCH
13_1_40cm_4_scaffold_1427_17
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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16890..18587
DNA (1698bp) protein (566aa)
Thermosome subunit n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVP9_9ARCH
Thermosome subunit {ECO:0000313|EMBL:CDI06629.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
thermosome
13_1_40cm_4_scaffold_1427_18

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18641..18919
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E6A6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KER06808.1}; TaxID=1502292 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-
hypothetical protein
13_1_40cm_4_scaffold_1427_19
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(18916..20376)
DNA (1461bp) protein (487aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota
glnA; glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVL7_9ARCH
13_1_40cm_4_scaffold_1427_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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20436..20993
DNA (558bp) protein (186aa)
hypothetical protein id=14428111 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_1427_21
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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21020..21292
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVM8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06625.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_1427_22

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21584..22372
DNA (789bp) protein (263aa)
sdr4; short-chain dehydrogenase/reductase Sdr (EC:1.1.1.-)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AIE98239.1}; TaxID=1455967 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_04_H06.;"
short-chain dehydrogenase/reductase SDR id=14428114 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_1427_23
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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22397..23530
DNA (1134bp) protein (378aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVL5_9ARCH
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CDI06622.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeo
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_4_scaffold_1427_trna_1
unknown

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23604..23678
DNA (75bp)
transferRNA
13_1_40cm_4_scaffold_1427_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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23778..24086
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL20_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59267.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1427_25
unknown

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24165..24458
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_4_scaffold_1427_26
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(24465..25073)
DNA (609bp) protein (203aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:CDI06619.1}; EC=3.2.2.21 {ECO:0000313|EMBL:CDI06619.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Tha
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVJ6_9ARCH
DNA-3-methyladenine glycosylase II
13_1_40cm_4_scaffold_1427_27
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(25075..26388)
DNA (1314bp) protein (438aa)
Cation diffusion facilitator family transporter n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B2F7_9ARCH
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AFS80208.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus
13_1_40cm_4_scaffold_1427_28
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(26430..27197)
DNA (768bp) protein (256aa)
Ser/Thr protein kinase id=14428117 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Ser/Thr protein kinase Tax=CSP1_1_Thaumarchaeota
Ser/Thr protein kinase
13_1_40cm_4_scaffold_1427_29
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(27169..28212)
DNA (1044bp) protein (348aa)
tRNA CCA-pyrophosphorylase (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] id=14428118 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
tRNA CCA-pyrophosphorylase (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=CSP1_1_Thaumarchaeota
tRNA CCA-pyrophosphorylase (EC:2.7.7.72)
Displaying 30 items

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