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13_1_40cm_4_scaffold_1686

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1686_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2..385
DNA (384bp) protein (128aa)
Mg-chelatase subunit ChlD
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:AIF84113.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Ni
13_1_40cm_4_scaffold_1686_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(552..1301)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I6Y6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57026.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1686_3
unknown

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1570..1764
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_4_scaffold_1686_4
RBG_13_Lokiarchaeota_45_8_curated, Lokiarchaeota, Archaea

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comp(1991..2317)
DNA (327bp) protein (109aa)
Pro-kumamolisin, activation domain family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDR2_ACIB4
Fibronectin type III domain protein Tax=RBG_13_Lokiarchaeota_45_8_curated
putative protease
13_1_40cm_4_scaffold_1686_5
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2506..3588
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8B1X4_9ALTE
Mg-chelatase subunit ChlD
Uncharacterized protein {ECO:0000313|EMBL:EON92574.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lip
13_1_40cm_4_scaffold_1686_6
unknown

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comp(3888..4100)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_1686_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(4271..5155)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASA7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05313.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_1686_8
unknown

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5784..6044
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_1686_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6274..6999
DNA (726bp) protein (242aa)
High-affinity nickel-transporter n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QDN9_RHOPT
high-affinity nickel permease
High-affinity nickel permease {ECO:0000313|EMBL:AIF84947.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatu
13_1_40cm_4_scaffold_1686_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(7394..9013)
DNA (1620bp) protein (540aa)
Thymidylate synthase complementing protein ThyX n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS89_9ARCH
Thymidylate synthase complementing protein ThyX {ECO:0000313|EMBL:CDI05444.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Thymidylate synthase complementing protein ThyX
13_1_40cm_4_scaffold_1686_11

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comp(9043..9324)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EV01_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF15791.1}; TaxID=1456258 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_71_E12.;"
hypothetical protein
13_1_40cm_4_scaffold_1686_12
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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9477..10295
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ART6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05446.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
cdcA; putative archaeal cell division protein CdvA
13_1_40cm_4_scaffold_1686_13
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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10382..12301
DNA (1920bp) protein (640aa)
acsA; Acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:AJW71123.1}; EC=6.2.1.1 {ECO:0000313|EMBL:AJW71123.1};; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumil
acetate--CoA ligase id=14427735 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_1686_14
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12294..12779)
DNA (486bp) protein (162aa)
Exported protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXG8_9ARCH
Exported protein {ECO:0000313|EMBL:EGP93970.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum ko
hypothetical protein
13_1_40cm_4_scaffold_1686_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12833..13183)
DNA (351bp) protein (117aa)
hypothetical protein id=14427790 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_1686_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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13302..13757
DNA (456bp) protein (152aa)
Transcriptional regulator mntR n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATG0_9ARCH
Transcriptional regulator mntR {ECO:0000313|EMBL:CDI05815.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
DtxR family iron dependent repressor
13_1_40cm_4_scaffold_1686_17
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(13758..15560)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASX0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05816.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ATPase
13_1_40cm_4_scaffold_1686_18
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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15645..16562
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT44_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05817.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_1686_19
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16552..16914)
DNA (363bp) protein (121aa)
Two-component response regulator involved in modulation of flagellar n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B6N1_9ARCH
two-component response regulator involved in modulation of flagellar
Two-component response regulator involved in modulation of flagellar {ECO:0000313|EMBL:AFS81149.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.
13_1_40cm_4_scaffold_1686_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16966..17334)
DNA (369bp) protein (123aa)
hypothetical protein
hypothetical protein id=14427794 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
13_1_40cm_4_scaffold_1686_21
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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17403..19256
DNA (1854bp) protein (618aa)
integral membrane sensor signal transduction histidine kinase id=14427795 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
integral membrane sensor signal transduction histidine kinase Tax=CSP1_1_Thaumarchaeota
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
13_1_40cm_4_scaffold_1686_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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19314..20729
DNA (1416bp) protein (472aa)
peptidase U62 modulator of DNA gyrase id=14427797 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
peptidase U62 modulator of DNA gyrase Tax=CSP1_1_Thaumarchaeota
peptidase U62 modulator of DNA gyrase
13_1_40cm_4_scaffold_1686_23
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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20731..21312
DNA (582bp) protein (194aa)
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EPA06457.1}; EC=3.2.2.- {ECO:0000313|EMBL:EPA06457.1};; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatu
Uracil-DNA glycosylase, family 4 n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EPU5_9ARCH
phage SPO1 DNA polymerase-like protein
13_1_40cm_4_scaffold_1686_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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21309..21881
DNA (573bp) protein (191aa)
DNA-3-methyladenine glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] id=14427799 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DNA-3-methyladenine glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=CSP1_1_Thaumarchaeota
putative 3-methyladenine DNA glycosylase (EC:3.2.2.-)
13_1_40cm_4_scaffold_1686_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21889..22923)
DNA (1035bp) protein (345aa)
2-alkenal reductase (EC:1.3.1.74)
2-alkenal reductase {ECO:0000313|EMBL:AFU59631.1}; EC=1.3.1.74 {ECO:0000313|EMBL:AFU59631.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; N
2-alkenal reductase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE46_NITGG
Displaying 25 items

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