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13_1_40cm_4_scaffold_19

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_19_1
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3..1379)
DNA (1377bp) protein (459aa)
Valine--tRNA ligase {ECO:0000313|EMBL:EPA04600.1}; EC=6.1.1.9 {ECO:0000313|EMBL:EPA04600.1};; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarch
valS; Valine--tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2DZS3_9ARCH
13_1_40cm_4_scaffold_19_2

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comp(1327..2148)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BDA3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM93756.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_4_scaffold_19_3

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comp(2210..2497)
DNA (288bp) protein (96aa)
putative pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATX4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM93755.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_4_scaffold_19_4

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2546..3349
DNA (804bp) protein (268aa)
Asparagine synthase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B927_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM93754.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
asparagine synthase
13_1_40cm_4_scaffold_19_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(3321..4637)
DNA (1317bp) protein (439aa)
Adenylosuccinate lyase {ECO:0000313|EMBL:CDI06152.1}; EC=4.3.2.2 {ECO:0000313|EMBL:CDI06152.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota a
purB; Adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUE8_9ARCH
13_1_40cm_4_scaffold_19_6
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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4989..6440
DNA (1452bp) protein (484aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarch
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATX1_9ARCH
tRNA-splicing ligase RtcB
13_1_40cm_4_scaffold_19_7
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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6437..6865
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EQ58_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW70128.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
13_1_40cm_4_scaffold_19_8

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6964..7287
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00036B84A0
Uncharacterized protein {ECO:0000313|EMBL:AIE98007.1}; TaxID=1455963 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_03_H02.;"
hypothetical protein
13_1_40cm_4_scaffold_19_9

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comp(7284..7685)
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KMT4_9ARCH
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1456070 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_186_C08.;"
rps; 30S ribosomal protein S11
13_1_40cm_4_scaffold_19_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7719..8675)
DNA (957bp) protein (319aa)
thiamine-monophosphate kinase id=14427412 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
thiamine-monophosphate kinase Tax=CSP1_1_Thaumarchaeota
thiamine-monophosphate kinase
13_1_40cm_4_scaffold_19_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8644..9999)
DNA (1356bp) protein (452aa)
phosphoglucomutase/phosphomannomutase subunit alpha/beta id=14427411 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
phosphoglucomutase/phosphomannomutase subunit alpha/beta Tax=CSP1_1_Thaumarchaeota
phosphoglucomutase/phosphomannomutase subunit alpha/beta
13_1_40cm_4_scaffold_19_trna_1
unknown

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10011..10084
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_19_12
unknown

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comp(10139..10246)
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_40cm_4_scaffold_19_13
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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comp(10459..10719)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5K2_9ARCH
hypothetical protein
Winged helix-turn-helix protein {ECO:0000313|EMBL:KFM16588.1}; TaxID=1503183 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC
13_1_40cm_4_scaffold_19_14
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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10922..11419
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KHY9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG43030.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
13_1_40cm_4_scaffold_19_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(11724..13478)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUE0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06139.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_19_trna_2
unknown

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comp(13534..13605)
DNA (72bp)
transferRNA
13_1_40cm_4_scaffold_19_16

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comp(13647..13868)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0X7_9ARCH
Transcription factor CBF/NF-Y/histone domain-containing protein {ECO:0000313|EMBL:AIF04820.1}; TaxID=1456057 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thauma
hmfA; DNA-binding protein HMf-1
13_1_40cm_4_scaffold_19_17
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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13970..14725
DNA (756bp) protein (252aa)
Hydrolase, TatD family n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0W8_9ARCH
Hydrolase, TatD family {ECO:0000313|EMBL:EIJ65361.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus salaria BD
TatD-related deoxyribonuclease
13_1_40cm_4_scaffold_19_18
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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14756..15013
DNA (258bp) protein (86aa)
30S ribosomal protein S17e n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3R4_NITMS
hypothetical protein
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (st
13_1_40cm_4_scaffold_19_19

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15070..15846
DNA (777bp) protein (259aa)
sulfur carrier protein ThiS id=14427401 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Thiamine S protein {ECO:0000313|EMBL:AIF25254.1}; TaxID=1456415 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_48_C08.;"
sulfur carrier protein ThiS
13_1_40cm_4_scaffold_19_20
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(15835..16356)
DNA (522bp) protein (174aa)
THUMP domain protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2ENG5_9ARCH
THUMP domain protein {ECO:0000313|EMBL:EPA06017.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum
THUMP domain-containing protein
13_1_40cm_4_scaffold_19_21

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comp(16353..16919)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00037A6447
Sua5/YciO/YrdC/YwlC family protein (RimN, SUA5) {ECO:0000313|EMBL:AIF24914.1}; TaxID=1456409 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000
Sua5/YciO/YrdC/YwlC family protein
13_1_40cm_4_scaffold_19_22
unknown

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17208..17300
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_4_scaffold_19_23
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17297..17587)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BGF9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS83356.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_4_scaffold_19_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17571..18206)
DNA (636bp) protein (212aa)
hypothetical protein id=14427397 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
conserved membrane protein of unknown function
13_1_40cm_4_scaffold_19_25
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(18257..18463)
DNA (207bp) protein (69aa)
hypothetical protein id=14427396 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_19_26
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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18535..18810
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUI0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06123.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_19_27

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comp(18807..19268)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI000360CE75
Uncharacterized protein {ECO:0000313|EMBL:AIF09991.1}; TaxID=1456147 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_42_C02.;"
hypothetical protein
13_1_40cm_4_scaffold_19_28
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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19350..20354
DNA (1005bp) protein (335aa)
adenylosuccinate synthetase (EC:6.3.4.4) id=14427393 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
adenylosuccinate synthetase (EC:6.3.4.4) Tax=CSP1_1_Thaumarchaeota
adenylosuccinate synthetase (EC:6.3.4.4)
Displaying items 1-30 of 50 in total

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