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13_1_40cm_4_scaffold_585

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_585_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3..548)
DNA (546bp) protein (182aa)
hypothetical protein id=14427155 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
conserved exported protein of unknown function
13_1_40cm_4_scaffold_585_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(583..1500)
DNA (918bp) protein (306aa)
hypothetical protein id=14427156 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
conserved exported protein of unknown function
13_1_40cm_4_scaffold_585_3

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comp(1512..2132)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D5G2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKK49188.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
conserved exported protein of unknown function
13_1_40cm_4_scaffold_585_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2161..3075)
DNA (915bp) protein (305aa)
hypothetical protein id=14427155 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
conserved exported protein of unknown function
13_1_40cm_4_scaffold_585_5
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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3248..3499
DNA (252bp) protein (84aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilac
DNA-directed RNA polymerase subunit H n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B2G7_9ARCH
RNA polymerase Rpb5
13_1_40cm_4_scaffold_585_6
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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3499..6846
DNA (3348bp) protein (1116aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatu
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUN4_9ARCH
13_1_40cm_4_scaffold_585_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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6848..10642
DNA (3795bp) protein (1265aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumar
Putative DNA-directed RNA polymerase subunit A n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARQ1_9ARCH
bifunctional DNA-directed RNA polymerase subunit A'/A''
13_1_40cm_4_scaffold_585_8
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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10635..10955
DNA (321bp) protein (107aa)
Ribosomal protein L7Ae n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E130_9ARCH
Ribosomal protein L7Ae
Ribosomal protein L7Ae {ECO:0000313|EMBL:AJW71578.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;
13_1_40cm_4_scaffold_585_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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11026..11484
DNA (459bp) protein (153aa)
Putative NusA family KH domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARQ7_9ARCH
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
NusA family protein
13_1_40cm_4_scaffold_585_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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11491..11928
DNA (438bp) protein (146aa)
30S ribosomal protein S12P n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR63_9ARCH
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archae
30S ribosomal protein S12
13_1_40cm_4_scaffold_585_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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11932..12531
DNA (600bp) protein (200aa)
30S ribosomal protein S7 id=14427147 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
30S ribosomal protein S7 Tax=CSP1_1_Thaumarchaeota
30S ribosomal protein S7
13_1_40cm_4_scaffold_585_trna_1
unknown

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comp(12554..12657)
DNA (104bp)
transferRNA
13_1_40cm_4_scaffold_585_12

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comp(12690..13010)
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF06958.1}; TaxID=1456088 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_197_F10.;"
hypothetical protein id=14427146 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
13_1_40cm_4_scaffold_585_13
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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13050..13754
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUP4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP93090.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarch
hypothetical protein
13_1_40cm_4_scaffold_585_14

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comp(13751..14773)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Bacteria RepID=UPI000378948A
Dehydrogenase (Flavoprotein)-like protein {ECO:0000313|EMBL:AIF06956.1}; TaxID=1456088 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_197_F10.;
tryptophan halogenase domain protein
13_1_40cm_4_scaffold_585_15

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comp(14806..16863)
DNA (2058bp) protein (686aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1456295 species="Archaea; Thaumar
leuS; leucine--tRNA ligase (EC:6.1.1.4)
hypothetical protein n=3 Tax=cellular organisms RepID=UPI00037D5D82
Displaying 16 items

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