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13_1_40cm_4_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6_1

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2..415
DNA (414bp) protein (138aa)
shikimate 5-dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] id=14428507 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Uncharacterized protein {ECO:0000313|EMBL:KKM24087.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
shikimate 5-dehydrogenase
13_1_40cm_4_scaffold_6_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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418..1269
DNA (852bp) protein (284aa)
aroK; Shikimate kinase (EC:2.7.1.71)
shikimate kinase id=14428506 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
shikimate kinase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_4_scaffold_6_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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1259..2524
DNA (1266bp) protein (422aa)
3-phosphoshikimate 1-carboxyvinyltransferase id=14428505 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
3-phosphoshikimate 1-carboxyvinyltransferase Tax=CSP1_1_Thaumarchaeota
3-phosphoshikimate 1-carboxyvinyltransferase
13_1_40cm_4_scaffold_6_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(2540..3346)
DNA (807bp) protein (269aa)
Putative GCN5-related N-acetyltransferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVU1_9ARCH
Putative GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDI06707.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
N-acetyltransferase GCN5
13_1_40cm_4_scaffold_6_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3461..4555
DNA (1095bp) protein (365aa)
chorismate synthase (EC:4.2.3.5) id=14428504 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
chorismate synthase (EC:4.2.3.5) Tax=CSP1_1_Thaumarchaeota
chorismate synthase (EC:4.2.3.5)
13_1_40cm_4_scaffold_6_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4562..5932
DNA (1371bp) protein (457aa)
class I/II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1] id=14428503 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
class I/II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=CSP1_1_Thaumarchaeota
class I/II aminotransferase
13_1_40cm_4_scaffold_6_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5929..6783
DNA (855bp) protein (285aa)
prephenate dehydrogenase id=14428502 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
prephenate dehydrogenase Tax=CSP1_1_Thaumarchaeota
Prephenate dehydrogenase
13_1_40cm_4_scaffold_6_8

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6868..7188
DNA (321bp) protein (107aa)
Dihydroneopterin triphosphate pyrophosphatase protein {ECO:0000313|EMBL:KFM16943.1}; EC=3.6.1.17 {ECO:0000313|EMBL:KFM16943.1};; TaxID=1502291 species="Archaea; Thaumarchaeota; unclassified Thaumarcha
NUDIX hydrolase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVJ7_9ARCH
NUDIX hydrolase
13_1_40cm_4_scaffold_6_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7171..8487)
DNA (1317bp) protein (439aa)
thiC; phosphomethylpyrimidine synthase (EC:4.1.99.17)
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC id=14428500 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=CSP1_1_Thaumarchaeota
13_1_40cm_4_scaffold_6_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(8644..9594)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU06_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05928.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_4_scaffold_6_11
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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9714..11018
DNA (1305bp) protein (435aa)
Phosphomethylpyrimidine kinase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CVJ3_9ARCH
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EGP93295.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitr
Phosphomethylpyrimidine kinase
13_1_40cm_4_scaffold_6_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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11066..11767
DNA (702bp) protein (234aa)
nucleotidyl transferase id=14428498 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
nucleotidyl transferase Tax=CSP1_1_Thaumarchaeota
Nucleotidyl transferase
13_1_40cm_4_scaffold_6_13
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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11779..12225
DNA (447bp) protein (149aa)
Acetyltransferase, GNAT family n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E0Z8_9ARCH
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EPA05010.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitro
N-acetyltransferase GCN5
13_1_40cm_4_scaffold_6_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12207..12635)
DNA (429bp) protein (143aa)
hypothetical protein id=14428496 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_6_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(12677..13714)
DNA (1038bp) protein (346aa)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQP6_9ARCH
Galactose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:CDI04875.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
galactose-1-phosphate uridylyltransferase
13_1_40cm_4_scaffold_6_16
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13920..14354
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5R9_METEZ
FKBP-type peptidylprolyl isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Me
13_1_40cm_4_scaffold_6_17
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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14444..15733
DNA (1290bp) protein (430aa)
Phosphoglycerate mutase {ECO:0000313|EMBL:CDI04874.1}; EC=5.4.2.- {ECO:0000313|EMBL:CDI04874.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota
Phosphoglycerate mutase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQM4_9ARCH
phosphoglycerate mutase
13_1_40cm_4_scaffold_6_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(15723..16271)
DNA (549bp) protein (183aa)
hypothetical protein id=14428493 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
PF03745 domain protein
13_1_40cm_4_scaffold_6_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16369..16866
DNA (498bp) protein (166aa)
hypothetical protein id=14428492 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_6_20

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16866..17039
DNA (174bp) protein (58aa)
30S ribosomal protein S27 n=1 Tax=Bacteria RepID=UPI000370177B
Uncharacterized protein {ECO:0000313|EMBL:KKK88514.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rps27ae; 30S ribosomal protein S27ae
13_1_40cm_4_scaffold_6_21
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17040..17804)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B6A5_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJM92955.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.
13_1_40cm_4_scaffold_6_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17859..19022)
DNA (1164bp) protein (388aa)
pseudouridylate synthase-like protein; K07583 tRNA pseudouridine synthase 10 [EC:5.4.99.-] id=14428489 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
pseudouridylate synthase-like protein; K07583 tRNA pseudouridine synthase 10 [EC:5.4.99.-] Tax=CSP1_1_Thaumarchaeota
pseudouridylate synthase-like protein
13_1_40cm_4_scaffold_6_23
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19071..19751)
DNA (681bp) protein (227aa)
heat shock protein DnaJ domain-containing protein id=14427765 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
heat shock protein DnaJ domain-containing protein Tax=CSP1_1_Thaumarchaeota
heat shock protein DnaJ domain-containing protein
13_1_40cm_4_scaffold_6_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19811..21136)
DNA (1326bp) protein (442aa)
GTP-binding signal recognition particle id=14428488 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
GTP-binding signal recognition particle Tax=CSP1_1_Thaumarchaeota
GTP-binding signal recognition particle
13_1_40cm_4_scaffold_6_25
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(21136..21819)
DNA (684bp) protein (228aa)
ATP-binding protein Tax=CSP1_1_Thaumarchaeota
ATP-binding protein id=14428487 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ATP-binding protein
13_1_40cm_4_scaffold_6_26
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(22094..22501)
DNA (408bp) protein (136aa)
Putative translation initiation factor 5A n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQ92_9ARCH
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
eif5A; translation elongation factor IF5A
13_1_40cm_4_scaffold_6_27
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(22599..23210)
DNA (612bp) protein (204aa)
hypothetical protein id=14428466 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_4_scaffold_6_trna_1
unknown

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23348..23467
DNA (120bp)
transferRNA
13_1_40cm_4_scaffold_6_28
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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23509..24015
DNA (507bp) protein (169aa)
AsnC/Lrp family transcriptional regulator n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BDA9_9ARCH
AsnC/Lrp family transcriptional regulator
AsnC/Lrp family transcriptional regulator {ECO:0000313|EMBL:AFS82336.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitro
13_1_40cm_4_scaffold_6_29

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comp(24008..24754)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR05_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL06347.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
two-component response regulator KdpE
Displaying items 1-30 of 53 in total

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