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13_1_40cm_4_scaffold_778

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_778_1
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3..449)
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Nitrosopumilaceae RepID=K0B6J6_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS81109.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_4_scaffold_778_2

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comp(797..1246)
DNA (450bp) protein (150aa)
Putative 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEN5_NITGG
Zinc-containing ferredoxin {ECO:0000256|PIRNR:PIRNR000068}; TaxID=1456270 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_74_C10.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
13_1_40cm_4_scaffold_778_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1386..1727
DNA (342bp) protein (114aa)
Putative nitrogen regulatory protein P-II n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8W4_NITGG
nitrogen regulatory protein P-II
Putative nitrogen regulatory protein P-II {ECO:0000313|EMBL:AFU57681.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sourc
13_1_40cm_4_scaffold_778_4

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comp(1764..2318)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=2 Tax=environmental samples RepID=B3TBF1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF10618.1}; TaxID=1456162 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_46_G12.;"
13_1_40cm_4_scaffold_778_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(2392..3189)
DNA (798bp) protein (266aa)
Transcriptional regulator, ArsR family n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT95_9ARCH
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDI05643.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ArsR family transcriptional regulator
13_1_40cm_4_scaffold_778_6

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3274..3588
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KNB7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF08000.1}; TaxID=1456106 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_26_A01.;"
conserved exported protein of unknown function
13_1_40cm_4_scaffold_778_7
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(3710..5941)
DNA (2232bp) protein (744aa)
Copper amine oxidase-like protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVU7_9ARCH
Copper amine oxidase-like protein {ECO:0000313|EMBL:CDI06711.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
copper amine oxidase-like protein
13_1_40cm_4_scaffold_778_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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6021..7073
DNA (1053bp) protein (351aa)
Transcriptional regulator, ArsR family n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT95_9ARCH
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDI05643.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ArsR family transcriptional regulator
13_1_40cm_4_scaffold_778_9
unknown

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comp(7135..7884)
DNA (750bp) protein (250aa)

This feature has no annotations

13_1_40cm_4_scaffold_778_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(8003..8392)
DNA (390bp) protein (130aa)
Transcriptional regulator, HxlR family n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARE0_9ARCH
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:CDI05110.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
HxlR family transcriptional regulator
13_1_40cm_4_scaffold_778_11
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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8524..8838
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQV4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05111.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_4_scaffold_778_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8911..9300)
DNA (390bp) protein (130aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QP56_SPILD
putative lactoylglutathione lyase
Putative lactoylglutathione lyase {ECO:0000313|EMBL:AIF82122.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candi
13_1_40cm_4_scaffold_778_13

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comp(9390..9857)
DNA (468bp) protein (156aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Desulfosporosinus sp. OT RepID=G2G1R8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF13891.1}; TaxID=1456222 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_65_A05.;"
13_1_40cm_4_scaffold_778_14
unknown

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comp(9966..10313)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_4_scaffold_778_15
R_WOR_2_41_12, WOR-2, Bacteria

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comp(10418..11782)
DNA (1365bp) protein (455aa)
Probable formate transporter 1 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YAH5_9DELT
Formate efflux transporter Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
formate/nitrite transporter
13_1_40cm_4_scaffold_778_16
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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11979..12347
DNA (369bp) protein (123aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B369_9ARCH
response regulator receiver modulated diguanylate cyclase
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:AFS80498.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="
13_1_40cm_4_scaffold_778_17
RBG_13_Lokiarchaeota_45_8_curated, Lokiarchaeota, Archaea

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12344..13387
DNA (1044bp) protein (348aa)
Signal transduction histidine kinase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R0W0_METFO
PAS domain S-box Tax=RBG_13_Lokiarchaeota_45_8_curated
signal transduction histidine kinase, with PAS, phosphoacceptor and ATP binding domain
Displaying 17 items

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