ggKbase home page

13_1_20cm_full_scaffold_111

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_111_1
unknown

Not on your lists

comp(3..320)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_full_scaffold_111_2
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

403..2064
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003788EFE
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:ADW68881.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicel
13_1_20cm_full_scaffold_111_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2180..3394)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003698BB5 rbh
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ABF39451.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="
13_1_20cm_full_scaffold_111_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3615..6374
DNA (2760bp) protein (920aa)
Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKQ5_KORVE rbh
lysine decarboxylase transcriptional regulator CadC
Lysine decarboxylase transcriptional regulator, CadC {ECO:0000313|EMBL:ABF42545.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source=
13_1_20cm_full_scaffold_111_5
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6481..6837
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V5C5_TERSS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV84884.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA
13_1_20cm_full_scaffold_111_6

Not on your lists

comp(6881..8491)
DNA (1611bp) protein (537aa)
Adenosine deaminase {ECO:0000313|EMBL:CBH99987.1}; EC=3.5.4.4 {ECO:0000313|EMBL:CBH99987.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000366750A
adenosine deaminase
13_1_20cm_full_scaffold_111_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8642..9715
DNA (1074bp) protein (358aa)
Purine nucleoside permease n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021R0_SOLUE rbh
purine nucleoside permease
Purine nucleoside permease {ECO:0000313|EMBL:ABJ84315.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" sour
13_1_20cm_full_scaffold_111_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(9901..11139)
DNA (1239bp) protein (413aa)
amidase (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:ABJ81376.1}; EC=3.5.1.87 {ECO:0000313|EMBL:ABJ81376.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Soliba
Amidase, hydantoinase/carbamoylase family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C40_SOLUE rbh
13_1_20cm_full_scaffold_111_9
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11136..11882)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000380254E rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW69897.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC
13_1_20cm_full_scaffold_111_10
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11875..13140)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000364A444
Strain A contig00056, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ54169.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiotherm
amidase
13_1_20cm_full_scaffold_111_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13179..13997)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00037159A6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPL62747.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
13_1_20cm_full_scaffold_111_12
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13999..14343)
DNA (345bp) protein (115aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S2Y3_9DELT
transthyretin family protein
13_1_20cm_full_scaffold_111_13
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14340..14852)
DNA (513bp) protein (171aa)
OHCU decarboxylase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UXZ7_TERSS
OHCU decarboxylase
OHCU decarboxylase {ECO:0000313|EMBL:ADV84231.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853
13_1_20cm_full_scaffold_111_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(14849..15421)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000371BD91
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_20cm_full_scaffold_111_15
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15674..16171)
DNA (498bp) protein (166aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZD58_TERRK
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:AFL87176.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terr
13_1_20cm_full_scaffold_111_16
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16168..18435)
DNA (2268bp) protein (756aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZD59_TERRK rbh
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein {ECO:0000313|EMBL:AFL87177.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terr
13_1_20cm_full_scaffold_111_17
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18622..19971)
DNA (1350bp) protein (450aa)
Allantoinase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZD76_TERRK
allantoinase
Allantoinase {ECO:0000313|EMBL:AFL87194.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-415
Displaying 17 items

View Taxonomy