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13_1_20cm_full_scaffold_1481

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1481_1
unknown

Not on your lists

2..73
DNA (72bp) protein (24aa)

This feature has no annotations

13_1_20cm_full_scaffold_1481_2
unknown

Not on your lists

comp(299..850)
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_20cm_full_scaffold_1481_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(972..1811)
DNA (840bp) protein (280aa)
Methylmalonyl-CoA mutase family protein {ECO:0000313|EMBL:CDM64417.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CDM64417.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomon
Methylmalonyl-CoA mutase, C-terminal domain/subunit n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D2I7_PELTS
MmcF; methylmalonyl-CoA mutase C-terminal domain-containing protein
13_1_20cm_full_scaffold_1481_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2071..3942)
DNA (1872bp) protein (624aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ABF40456.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ABF40456.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Korib
Methylmalonyl-CoA mutase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRP4_KORVE
methylmalonyl-CoA mutase
13_1_20cm_full_scaffold_1481_5
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(3975..5993)
DNA (2019bp) protein (673aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CC528
outer membrane efflux protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
outer membrane efflux protein
13_1_20cm_full_scaffold_1481_6
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6298..6915
DNA (618bp) protein (206aa)
Orotate phosphoribosyltransferase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GHW6_9FIRM
Orotate phosphoribosyltransferase Tax=S_Thermoanaerobacterales_50_218
orotate phosphoribosyltransferase
13_1_20cm_full_scaffold_1481_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6937..7719
DNA (783bp) protein (261aa)
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
tRNA pseudouridine synthase A n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1S9_ACIC5
truA; tRNA pseudouridine synthase A
13_1_20cm_full_scaffold_1481_8
unknown

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7861..8088
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_20cm_full_scaffold_1481_9
unknown

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comp(8279..8512)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_full_scaffold_1481_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8879..9235
DNA (357bp) protein (119aa)
Ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Ste24 endopeptidase (EC:3.4.24.84)
STE24 endopeptidase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y3S1_9PROT
13_1_20cm_full_scaffold_1481_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9244..10860
DNA (1617bp) protein (539aa)
Succinate-semialdehyde dehydrogenase (NAD(P)+) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ5_KORVE
succinate-semialdehyde dehydrogenase (NAD(P)+)
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (stra
13_1_20cm_full_scaffold_1481_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10872..11114
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QW1_SOLUE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_full_scaffold_1481_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11147..12382
DNA (1236bp) protein (412aa)
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:CDM66977.1}; EC=2.3.3.13 {ECO:0000313|EMBL:CDM66977.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 alias=16ft_combo_ws3_scaffold_2321_27 id=5224560 tax=16ft_combo_ws3 species=Sorangium cellulosum (strain So ce56) genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
13_1_20cm_full_scaffold_1481_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

12379..13689
DNA (1311bp) protein (437aa)
Peptidase M20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ6_KORVE
peptidase M20 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
peptidase M20
13_1_20cm_full_scaffold_1481_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13686..15398
DNA (1713bp) protein (571aa)
Amidohydrolase 3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ7_KORVE
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ABF40443.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
13_1_20cm_full_scaffold_1481_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

15679..16002
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037088CE
ISTde1, transposase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ISTde1, transposase
Displaying 16 items

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