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13_1_20cm_full_scaffold_2001

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_2001_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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3..1085
DNA (1083bp) protein (361aa)
Transglutaminase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPQ3_KORVE
transglutaminase-like Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
transglutaminase
13_1_20cm_full_scaffold_2001_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1196..2659
DNA (1464bp) protein (488aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RIMO_SOLUE
MiaB-like tRNA modifying protein YliG
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000255|HAMAP-Rule:MF_01865}; Short=S12 MTTase {ECO:0000255|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_0186
13_1_20cm_full_scaffold_2001_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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2961..3191
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028J1_SOLUE
hypothetical protein
DNA gyrase inhibitor YacG {ECO:0000256|SAAS:SAAS00085446}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usi
13_1_20cm_full_scaffold_2001_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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3175..3867
DNA (693bp) protein (231aa)
phosphatidylglycerophosphatase (EC:3.1.3.27)
Putative phosphatidyl-glycerophosphatase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2U7_9BACT
Putative phosphatidyl-glycerophosphatase {ECO:0000313|EMBL:AAP58617.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
13_1_20cm_full_scaffold_2001_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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3864..4913
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000370E5F9
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_20cm_full_scaffold_2001_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4910..5848
DNA (939bp) protein (313aa)
CinA-like protein n=1 Tax=uncultured bacterium 89 RepID=E3T697_9BACT
competence/damage-inducible protein cinA; K03742 competence/damage-inducible protein CinA Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
competence/damage-inducible protein CinA
13_1_20cm_full_scaffold_2001_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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5862..6140
DNA (279bp) protein (93aa)
CinA-like protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EQ78_MODMB
competence/damage-inducible protein cinA; K03742 competence/damage-inducible protein CinA Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Competence/damage-inducible CinA-like protein
13_1_20cm_full_scaffold_2001_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6147..6707
DNA (561bp) protein (187aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
2',5' RNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) IPR0_KORVE">RepID=Q1IPR0_KORVE
2'-5' RNA ligase
13_1_20cm_full_scaffold_2001_9
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

6714..7352
DNA (639bp) protein (213aa)
acyl-phosphate glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ASC6_PELPD
membrane protein
13_1_20cm_full_scaffold_2001_10
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

7349..8353
DNA (1005bp) protein (335aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFV8_9BACT
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
13_1_20cm_full_scaffold_2001_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8561..9085
DNA (525bp) protein (175aa)
Transposase ISLbp6 n=1 Tax=mine drainage metagenome RepID=T1BVA4_9ZZZZ
transposase ISLbp6 Tax=RBG_16_Deltaproteobacteria_64_85_curated
transposase ISLbp6
13_1_20cm_full_scaffold_2001_12

Not on your lists

9082..9588
DNA (507bp) protein (169aa)
Transposase n=1 Tax=mine drainage metagenome RepID=T0ZBE1_9ZZZZ
Transposase {ECO:0000313|EMBL:EQD72394.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative transposase
13_1_20cm_full_scaffold_2001_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9706..11502
DNA (1797bp) protein (599aa)
Metal dependent phosphohydrolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILB4_KORVE
metal dependent phosphohydrolase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
metal dependent phosphohydrolase
13_1_20cm_full_scaffold_2001_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11641..12612
DNA (972bp) protein (324aa)
Signal recognition particle receptor FtsY n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YT1_SOLUE
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibac
13_1_20cm_full_scaffold_2001_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

12640..13749
DNA (1110bp) protein (370aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILB2_KORVE
5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylami
5-amino-6-(5-phosphoribosylamino)uracil reductase
13_1_20cm_full_scaffold_2001_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13755..14756)
DNA (1002bp) protein (334aa)
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:CDM64523.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CDM64523.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
zinc-binding alcohol dehydrogenase family protein (EC:1.1.1.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379060A
13_1_20cm_full_scaffold_2001_17
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14864..15526
DNA (663bp) protein (221aa)
ial:IALB_2405 ribE; Riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] alias=RAAC39_AAC7_scaffold_396_58,RAAC39_C00022G00058 id=719659 tax=RAAC39 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria
ribE; Riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] Tax=CG_Ignavi_02
riboflavin synthase subunit alpha (EC:2.5.1.9)
13_1_20cm_full_scaffold_2001_18
unknown

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comp(15541..15885)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_20cm_full_scaffold_2001_19
Methanocorpusculum labreanum, Methanocorpusculum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16015..16293)
DNA (279bp) protein (93aa)
Amino acid permease-associated region n=1 Tax=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) RepID=A2SSB3_METLZ
Amino acid permease-associated region {ECO:0000313|EMBL:ABN07219.1}; TaxID=410358 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanocorpusculaceae; Methanocorpusculum.;" sou
hypothetical protein
13_1_20cm_full_scaffold_2001_20
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16331..17404)
DNA (1074bp) protein (358aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01N99_SOLUE
Amino acid permease {ECO:0000313|EMBL:GAO56766.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
amino acid permease
13_1_20cm_full_scaffold_2001_21
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17401..18177)
DNA (777bp) protein (259aa)
ABC transporter related n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XR7_SOLUE
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
ABC transporter-like protein
13_1_20cm_full_scaffold_2001_22
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(18174..18809)
DNA (636bp) protein (212aa)
molybdopterin-guanine dinucleotide biosynthesis protein; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IML2_KORVE
molybdenum cofactor guanylyltransferase
13_1_20cm_full_scaffold_2001_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18897..20174)
DNA (1278bp) protein (426aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A837_THEID
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CDM64893.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomo
Fis family two component sigma-54 specific transcriptional regulator
Displaying 23 items

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