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13_1_20cm_full_scaffold_3023

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3023_1
R_Deltaproteobacteria_50_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..242)
DNA (240bp) protein (80aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_50_16_curated
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Roseburia sp. CAG:303 RepID=R7IMJ0_9FIRM
13_1_20cm_full_scaffold_3023_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(239..985)
DNA (747bp) protein (249aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=ISPD_ACIC5
13_1_20cm_full_scaffold_3023_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(1128..1502)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CBDE3
PilT protein-like Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
twitching motility protein PilT
13_1_20cm_full_scaffold_3023_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1472..1834)
DNA (363bp) protein (121aa)
PilT protein domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027G0_SOLUE
PilT protein-like Tax=RBG_16_Acidobacteria_70_10_curated
twitching motility protein PilT
13_1_20cm_full_scaffold_3023_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1883..3091)
DNA (1209bp) protein (403aa)
alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Alanine racemase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIS9_KORVE
alanine racemase
13_1_20cm_full_scaffold_3023_6
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3570..4082)
DNA (513bp) protein (171aa)
Unclassified family transposase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F2K1_ACIC5
transposase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
transposase
13_1_20cm_full_scaffold_3023_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4120..4470)
DNA (351bp) protein (117aa)
Transposase of an IS1595 family member n=1 Tax=mine drainage metagenome RepID=E6PZH9_9ZZZZ
transposase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
transposase
13_1_20cm_full_scaffold_3023_8
unknown

Not on your lists

4827..5252
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_20cm_full_scaffold_3023_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6254..7621)
DNA (1368bp) protein (456aa)
primary replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Replicative DNA helicase n=1 Tax=Thermincola potens (strain JR) RepID=D5XDQ5_THEPJ
replicative DNA helicase
13_1_20cm_full_scaffold_3023_10

Not on your lists


comp(7885..8331)
DNA (447bp) protein (149aa)
50S ribosomal subunit protein L9 n=1 Tax=mine drainage metagenome RepID=E6PX70_9ZZZZ
50S ribosomal protein L9
50S ribosomal subunit protein L9 {ECO:0000313|EMBL:CBH99529.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_20cm_full_scaffold_3023_11
unknown

Not on your lists

8433..8855
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_20cm_full_scaffold_3023_12
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8994..9410)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F2CB1
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
rpsF; 30S ribosomal protein S6
13_1_20cm_full_scaffold_3023_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(9459..9923)
DNA (465bp) protein (155aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00083}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00083};; TaxID=234267 species="Bacteria; Acidobacteria;
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037D36E5
Displaying 13 items

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