ggKbase home page

13_1_20cm_full_scaffold_538

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_538_1
unknown

Not on your lists

501..623
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_20cm_full_scaffold_538_2
Paenibacillus wynnii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1000..1440
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000382DFC4
Polyketide cyclase {ECO:0000313|EMBL:KGE19121.1}; TaxID=268407 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus wynnii.;"
polyketide cyclase
13_1_20cm_full_scaffold_538_3
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1965..2546)
DNA (582bp) protein (194aa)
Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKT2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98869.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_1_20cm_full_scaffold_538_4
unknown

Not on your lists

2775..3068
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_full_scaffold_538_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2961..3794)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUH2_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39478.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_20cm_full_scaffold_538_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3791..6208)
DNA (2418bp) protein (806aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; C
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUH1_KORVE rbh
sensor signal transduction histidine kinase
13_1_20cm_full_scaffold_538_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6205..7569)
DNA (1365bp) protein (455aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUH0_KORVE
Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABF39480.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
13_1_20cm_full_scaffold_538_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(7627..9183)
DNA (1557bp) protein (519aa)
TPR repeat-containing protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4K0_DESAT
TPR-repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
TPR repeat-containing protein
13_1_20cm_full_scaffold_538_9
unknown

Not on your lists

comp(9373..9726)
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_full_scaffold_538_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10255..12816)
DNA (2562bp) protein (854aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037B0FA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39823.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_20cm_full_scaffold_538_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13080..14345)
DNA (1266bp) protein (422aa)
Major facilitator superfamily MFS_1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R09_SOLUE
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABJ87911.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soliba
13_1_20cm_full_scaffold_538_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14395..15423)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL08_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42442.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_20cm_full_scaffold_538_13
RLO_PLX_64_10, Bacteria

Not on your lists

comp(15459..15671)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RB4_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_1_20cm_full_scaffold_538_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15664..16386)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RB4_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87806.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_20cm_full_scaffold_538_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(16399..17184)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000372F9C6
outer membrane efflux protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
outer membrane efflux protein
13_1_20cm_full_scaffold_538_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17230..18159)
DNA (930bp) protein (310aa)
Chromate resistance exported protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC87_9BACT
Chromate resistance exported protein {ECO:0000313|EMBL:EDY15964.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ChrB protein
13_1_20cm_full_scaffold_538_17
unknown

Not on your lists

18259..18426
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_20cm_full_scaffold_538_18
unknown

Not on your lists

18672..18806
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_full_scaffold_538_19

Not on your lists

18828..19241
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:AKA49137.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Displaying 19 items

View Taxonomy