ggKbase home page

13_1_20cm_full_scaffold_5398

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_5398_1
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3..695
DNA (693bp) protein (231aa)
Oxidoreductase domain protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X5U1_ACISM
oxidoreductase
Oxidoreductase domain protein {ECO:0000313|EMBL:ADW70825.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicell
13_1_20cm_full_scaffold_5398_2
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

724..1605
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003665ADD
xylose isomerase
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADW70824.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicell
13_1_20cm_full_scaffold_5398_3
Acidobacteriaceae bacterium KBS 89, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2042..2143)
DNA (102bp) protein (34aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000371C32A
hypothetical protein
13_1_20cm_full_scaffold_5398_4
unknown

Not on your lists

comp(2227..2640)
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_20cm_full_scaffold_5398_5
unknown

Not on your lists

comp(2812..3165)
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_full_scaffold_5398_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3604..4473
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INH3_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41577.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_1_20cm_full_scaffold_5398_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4445..5896
DNA (1452bp) protein (484aa)
Intradiol ring-cleavage dioxygenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INH4_KORVE rbh
intradiol ring-cleavage dioxygenase
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:ABF41576.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sourc
13_1_20cm_full_scaffold_5398_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6032..7249)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036629FB
major facilitator transporter; K08178 MFS transporter, SHS family, lactate transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
major facilitator superfamily MFS_1
13_1_20cm_full_scaffold_5398_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7251..9074)
DNA (1824bp) protein (608aa)
Na+/solute symporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN77_KORVE
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ABF41673.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain E
13_1_20cm_full_scaffold_5398_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9123..10595)
DNA (1473bp) protein (491aa)
Dihydroorotase {ECO:0000313|EMBL:ABF42041.1}; EC=3.5.2.3 {ECO:0000313|EMBL:ABF42041.1};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidat
Dihydroorotase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM59_KORVE
D-glutamate deacylase
13_1_20cm_full_scaffold_5398_11
unknown

Not on your lists

comp(10786..10983)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_full_scaffold_5398_12
unknown

Not on your lists

comp(10995..11201)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_full_scaffold_5398_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11417..12328
DNA (912bp) protein (304aa)
Patatin n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INT2_KORVE
patatin
Patatin {ECO:0000313|EMBL:ABF41468.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
13_1_20cm_full_scaffold_5398_14
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

12516..13199
DNA (684bp) protein (228aa)
dedA; protein dedA (Protein DSG-1) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Protein dedA (Protein DSG-1) alias=gwa2_scaffold_135_8 id=5041744 tax=GW2011_AR4 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=gwa2_.45_18
hypothetical protein
13_1_20cm_full_scaffold_5398_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

13203..13823
DNA (621bp) protein (207aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B40_SOLUE
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
HAD family hydrolase
13_1_20cm_full_scaffold_5398_16
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

14046..14906
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V564_TERSS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_20cm_full_scaffold_5398_17
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

15049..15897
DNA (849bp) protein (283aa)
Mannosyl-3-phosphoglycerate phosphatase (EC:3.1.3.70) Tax=RBG_16_Aminicenantes_66_30_curated
mannosyl-3-phosphoglycerate phosphatase (EC:3.1.3.70)
Mannosyl-3-phosphoglycerate phosphatase family protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JJ56_SYNJB
13_1_20cm_full_scaffold_5398_18
unknown

Not on your lists

16159..16338
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_full_scaffold_5398_19
unknown

Not on your lists

16515..16871
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_20cm_full_scaffold_5398_20
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(17047..17796)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A92_SOLUE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_20cm_full_scaffold_5398_21
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17799..18044)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8V6_ACIC5
Uncharacterized protein {ECO:0000313|EMBL:ACO34138.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
hypothetical protein
Displaying 21 items

View Taxonomy