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13_1_20cm_full_scaffold_57

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_57_1

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1..462
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003615486
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:CBH99503.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
efflux ABC transporter inner membrane protein
13_1_20cm_full_scaffold_57_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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868..1572
DNA (705bp) protein (235aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFV6_SINAD
methylase
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGA28142.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisph
13_1_20cm_full_scaffold_57_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1675..3102
DNA (1428bp) protein (476aa)
Amino acid transporter n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P8W1_CYAGP
amino acid permease-associated protein; K03294 basic amino acid/polyamine antiporter, APA family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
amino acid permease-associated region
13_1_20cm_full_scaffold_57_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(3099..4673)
DNA (1575bp) protein (525aa)
pruA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UEV0_FERPD
13_1_20cm_full_scaffold_57_5
unknown

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4985..5212
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_20cm_full_scaffold_57_6
CG_Arma_02, Armatimonadetes, Bacteria

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5382..6272
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036FC94E
phytanoyl-CoA dioxygenase Tax=CG_Arma_02
Phytanoyl-CoA dioxygenase
13_1_20cm_full_scaffold_57_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(6322..6858)
DNA (537bp) protein (179aa)
DinB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025A5_SOLUE
DinB family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
DinB family protein
13_1_20cm_full_scaffold_57_8
unknown

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comp(6867..7538)
DNA (672bp) protein (224aa)

This feature has no annotations

13_1_20cm_full_scaffold_57_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(7670..9019)
DNA (1350bp) protein (450aa)
Putative GAF sensor protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRK4_KORVE
GAF sensor protein
Putative GAF sensor protein {ECO:0000313|EMBL:ABF40496.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (s
13_1_20cm_full_scaffold_57_10
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9312..10928)
DNA (1617bp) protein (539aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=240015 spe
Formate--tetrahydrofolate ligase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F273_ACIC5 rbh
13_1_20cm_full_scaffold_57_11
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11039..12100)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037CBCC0
NHL repeat containing protein
NHL repeat containing protein {ECO:0000313|EMBL:ADG18772.1}; Flags: Precursor;; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" s
13_1_20cm_full_scaffold_57_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(12150..12536)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035E6E48
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42599.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_20cm_full_scaffold_57_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(13389..14741)
DNA (1353bp) protein (451aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RBG_16_Actinobacteria_68_12_curated
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002EC5FC2
13_1_20cm_full_scaffold_57_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14804..16450)
DNA (1647bp) protein (549aa)
Amine oxidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS77_KORVE
amine oxidase
Amine oxidase {ECO:0000313|EMBL:ABF40273.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
13_1_20cm_full_scaffold_57_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16396..18135)
DNA (1740bp) protein (580aa)
FAD dependent oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS78_KORVE
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABF40272.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (
13_1_20cm_full_scaffold_57_16
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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18493..19845
DNA (1353bp) protein (451aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8N1_GEOUR
diguanylate cyclase/phosphodiesterase Tax=GWA2_Gallionellales_55_18_curated
response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor
13_1_20cm_full_scaffold_57_17
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20098..20724
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036B32EE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL89133.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus
13_1_20cm_full_scaffold_57_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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20736..21740
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371A1F8
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:CDM64608.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogene
glucose-methanol-choline oxidoreductase
Displaying 18 items

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