ggKbase home page

13_1_20cm_full_scaffold_923

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_923_1
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..373
DNA (372bp) protein (124aa)
Rhodanese domain-containing protein n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HEI1_9BACL
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum URH17-
rhodanese domain-containing protein
13_1_20cm_full_scaffold_923_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

560..1285
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037BCE14
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_full_scaffold_923_3
unknown

Not on your lists

1417..1752
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_20cm_full_scaffold_923_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2128..2526)
DNA (399bp) protein (133aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_20cm_full_scaffold_923_5
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2614..3903)
DNA (1290bp) protein (430aa)
gltA; citrate synthase; K01647 citrate synthase [EC:2.3.3.1] Tax=GWA2_Ignavibacteria_54_16_curated
citrate synthase I (EC:2.3.3.1)
Citrate synthase n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3ATT5_CHLCH
13_1_20cm_full_scaffold_923_6
unknown

Not on your lists

4369..4473
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_20cm_full_scaffold_923_7
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4750..6114)
DNA (1365bp) protein (455aa)
Beta-1,4-xylanase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W7W0_9CYAN
beta-1,4-xylanase Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
beta-1,4-xylanase
13_1_20cm_full_scaffold_923_8
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6465..6782
DNA (318bp) protein (106aa)
Pirin domain protein n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9PVT3_9CYAN
Pirin domain-containing protein
Pirin domain protein {ECO:0000313|EMBL:AFY36637.1}; TaxID=111781 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7376.;"
13_1_20cm_full_scaffold_923_9
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6839..8572)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8NLG7_RALSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBJ41571.1}; TaxID=859656 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearu
13_1_20cm_full_scaffold_923_10
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

8632..9993
DNA (1362bp) protein (454aa)
Uncharacterized protein alias=RBG1_248,RBG1_C00001G00248 id=1249806 tax=RBG1 species=Trichosporon asahii genus=Trichosporon taxon_order=Tremellales taxon_class=Tremellomycetes phylum=Basidiomycota rbh
hypothetical protein Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
hypothetical protein
13_1_20cm_full_scaffold_923_11
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10070..11191)
DNA (1122bp) protein (374aa)
phosphoserine aminotransferase apoenzyme (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
MFS transporter n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B79786
13_1_20cm_full_scaffold_923_12
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

11499..12281
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P0Y0_GRAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU35827.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
13_1_20cm_full_scaffold_923_13
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12281..12583
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IJX1_9PLAN
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
13_1_20cm_full_scaffold_923_14
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12580..13782
DNA (1203bp) protein (401aa)
Radical SAM domain protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P0Y2_GRAMM
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:AEU35829.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATC
13_1_20cm_full_scaffold_923_15
unknown

Not on your lists

13879..14070
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_full_scaffold_923_16
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14231..14779
DNA (549bp) protein (183aa)
Peptidase S24/S26A/S26B, conserved region n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P0X9_GRAMM
Peptidase S24/S26A/S26B, conserved region
Peptidase S24/S26A/S26B, conserved region {ECO:0000313|EMBL:AEU35826.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallen
13_1_20cm_full_scaffold_923_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(14800..17310)
DNA (2511bp) protein (837aa)
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
RNAse R (EC:3.1.-.-)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036D27E6
13_1_20cm_full_scaffold_923_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17525..18757)
DNA (1233bp) protein (411aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Ko
RNA-splicing ligase RtcB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS75_KORVE
hypothetical protein
13_1_20cm_full_scaffold_923_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(18776..19558)
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIF8_KORVE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_full_scaffold_923_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19741..20121
DNA (381bp) protein (127aa)
PadR family transcripitonal regulator n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FD212
PadR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PadR family transcriptional regulator
13_1_20cm_full_scaffold_923_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20278..22830
DNA (2553bp) protein (851aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003752A35
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_20cm_full_scaffold_923_22
unknown

Not on your lists

22862..23131
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_full_scaffold_923_trna_1
unknown

Not on your lists

comp(22935..23018)
DNA (84bp)
transferRNA
13_1_20cm_full_scaffold_923_23
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

23441..23728
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRB6_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_20cm_full_scaffold_923_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(23753..24376)
DNA (624bp) protein (208aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_20cm_full_scaffold_923_25
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(24621..27254)
DNA (2634bp) protein (878aa)
Uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFL7_CHLTF
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_full_scaffold_923_26
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27286..28632)
DNA (1347bp) protein (449aa)
amino acid permease n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4AAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII52218.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
13_1_20cm_full_scaffold_923_27
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

28809..29762
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJJ2_RUNSL
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_20cm_full_scaffold_923_28
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

30091..31614
DNA (1524bp) protein (508aa)
WD40 domain-containing protein n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3D821_9ACTO
WD40 domain-containing protein
WD40 domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Displaying 29 items

View Taxonomy