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13_1_20cm_full_scaffold_935

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_935_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1..561)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F3860D
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABF40836.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_20cm_full_scaffold_935_2
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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605..1501
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KEQ6_9FIRM
coenzyme F420-dependent NADP oxidoreductase Tax=RBG_13_Nitrospirae_39_12_curated
hypothetical protein
13_1_20cm_full_scaffold_935_3
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1498..2829
DNA (1332bp) protein (444aa)
M16 family peptidase (EC:3.4.24.-)
Peptidase, M16 (Pitrilysin) family {ECO:0000313|EMBL:ABF91009.1}; EC=3.4.24.- {ECO:0000313|EMBL:ABF91009.1};; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystoba
Peptidase, M16 (Pitrilysin) family n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DBU8_MYXXD
13_1_20cm_full_scaffold_935_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2829..4199
DNA (1371bp) protein (457aa)
Peptidase M16 domain protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QSJ2_CHLT3
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66641.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M16 domain protein
13_1_20cm_full_scaffold_935_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(4260..5423)
DNA (1164bp) protein (388aa)
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFCSPLOWO2_02_FULL_Acid
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILV9_KORVE
GTP cyclohydrolase II
13_1_20cm_full_scaffold_935_6
unknown

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5533..6081
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_20cm_full_scaffold_935_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(6225..7220)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MP74_9BACT
Phosphate/sulfate permease; K03306 inorganic phosphate transporter, PiT family Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
phosphate/sulfate permease
13_1_20cm_full_scaffold_935_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7224..7850)
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILW9_KORVE
hypothetical protein; K07220 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_full_scaffold_935_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(8281..9804)
DNA (1524bp) protein (508aa)
60 kDa chaperonin n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=CH60_KORVE
groEL; chaperonin GroEL; K04077 chaperonin GroEL Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
groEL; molecular chaperone GroEL
13_1_20cm_full_scaffold_935_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(9918..10232)
DNA (315bp) protein (105aa)
molecular chaperone GroES n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003615BC1
groES; chaperonin, 10 kDa; K04078 chaperonin GroES Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
groES; chaperonin, 10 kDa
13_1_20cm_full_scaffold_935_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10489..12534
DNA (2046bp) protein (682aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrin
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IHM6_9PLAN
sensor histidine kinase/response regulator
13_1_20cm_full_scaffold_935_12
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12537..13049
DNA (513bp) protein (171aa)
Sigma-54 dependent transcriptional regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDL1_9BACT
sigma-54 dependent transcriptional regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=RBG_13_Deltaproteobacteria_65_10_curated
sigma-54 dependent transcriptional regulator
Displaying 12 items

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