ggKbase home page

13_1_20cm_2_scaffold_5613

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5613_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

1..399
DNA (399bp) protein (133aa)
L-seryl-tRNA(Sec) selenium transferase; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020K6_SOLUE
13_1_20cm_2_scaffold_5613_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(444..1481)
DNA (1038bp) protein (346aa)
streptogramin lyase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_20cm_2_scaffold_5613_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(1424..2452)
DNA (1029bp) protein (343aa)
streptogramin lyase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_20cm_2_scaffold_5613_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(2649..3212)
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020K5_SOLUE
translation elongation factor P (EF-P); K02356 elongation factor P Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
translation elongation factor P (EF-P)
13_1_20cm_2_scaffold_5613_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3382..3723
DNA (342bp) protein (114aa)
Putative transcriptional regulator n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNX5_SINAD
CopY family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
transcriptional regulator
13_1_20cm_2_scaffold_5613_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3720..5354
DNA (1635bp) protein (545aa)
TonB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X37_SOLUE
TonB family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TonB family protein
13_1_20cm_2_scaffold_5613_7
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5391..5918
DNA (528bp) protein (176aa)
methionine sulfoxide reductase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B2E1CB
Uncharacterized protein {ECO:0000313|EMBL:KFN44869.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
methionine-R-sulfoxide reductase
13_1_20cm_2_scaffold_5613_8
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

5915..6592
DNA (678bp) protein (226aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
msrA; peptide methionine sulfoxide reductase (EC:1.8.4.11)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035EFE73
13_1_20cm_2_scaffold_5613_9
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6597..7175
DNA (579bp) protein (193aa)
Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028W1_SOLUE
Thiosulfate reductase {ECO:0000313|EMBL:AIZ63836.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
hypothetical protein
13_1_20cm_2_scaffold_5613_10
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7186..7890
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003748A43
Molybdopterin-binding oxidoreductase {ECO:0000313|EMBL:AIZ63835.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG
molybdopterin-binding oxidoreductase
13_1_20cm_2_scaffold_5613_11
unknown

Not on your lists

7936..8382
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_20cm_2_scaffold_5613_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8508..9524)
DNA (1017bp) protein (339aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase alias=RBG1_1631,RBG1_C00001G01631 id=1251189 tax=RBG1 species=unknown genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria
Displaying 12 items

View Taxonomy