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13_1_20cm_2_scaffold_6175

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_6175_1
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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comp(3..1124)
DNA (1122bp) protein (374aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6L8_GEODF
two component, sigma54 specific, transcriptional regulator, Fis family Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
Fis family transcriptional regulator
13_1_20cm_2_scaffold_6175_2
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

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comp(1121..2602)
DNA (1482bp) protein (494aa)
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIC4_SYNFM
signal transduction histidine kinase, nitrogen specific, NtrB Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
signal transduction histidine kinase, nitrogen specific, NtrB
13_1_20cm_2_scaffold_6175_3
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

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comp(2618..3232)
DNA (615bp) protein (205aa)
peptidase A24A domain-containing protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
pilD; type IV pilus prepilin peptidase PilD (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8D9_9BACT
13_1_20cm_2_scaffold_6175_4
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

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comp(3242..4399)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YZ62_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
Flp pilus assembly protein TadD
13_1_20cm_2_scaffold_6175_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(4396..5277)
DNA (882bp) protein (294aa)
Putative secretion ATPase, PEP-CTERM locus family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FE27_9DELT
peptidoglycan-binding domain 1 protein; K02450 general secretion pathway protein A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
peptidoglycan-binding domain 1 protein
13_1_20cm_2_scaffold_6175_6
CSP1_5_NC10, NC10, Bacteria

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comp(5278..6837)
DNA (1560bp) protein (520aa)
Type II secretory pathway, component PulD n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AE6E
mshL; MSHA biogenesis protein MshL; K12282 MSHA biogenesis protein MshL Tax=CSP1_5_NC10
type II and III secretion system protein
13_1_20cm_2_scaffold_6175_7
Chlamydomonas incerta, Chlamydomonas, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

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comp(6834..7385)
DNA (552bp) protein (184aa)
Vegetative cell wall protein n=1 Tax=Chlamydomonas incerta RepID=A0N015_CHLIN
Vegetative cell wall protein {ECO:0000313|EMBL:ABK42021.1}; TaxID=51695 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.;" source="C
13_1_20cm_2_scaffold_6175_8
unknown

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comp(7382..7963)
DNA (582bp) protein (194aa)

This feature has no annotations

13_1_20cm_2_scaffold_6175_9
CSP1_5_NC10, NC10, Bacteria

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comp(7948..9453)
DNA (1506bp) protein (502aa)
Tax=CSP1_5_NC10
13_1_20cm_2_scaffold_6175_10
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(9462..10151)
DNA (690bp) protein (230aa)
Tfp pilus biogenesis protein PilC n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D2C9_HALOH
Tfp pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
Tfp pilus biogenesis protein PilC
Displaying 10 items

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