ggKbase home page

13_1_20cm_2_scaffold_2439

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2439_1
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

81..758
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036B43C0
Zn-dependent protease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
peptidase M50
13_1_20cm_2_scaffold_2439_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

758..1810
DNA (1053bp) protein (351aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJU0_KORVE rbh
tryptophanyl-tRNA synthetase
13_1_20cm_2_scaffold_2439_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1826..2707
DNA (882bp) protein (294aa)
Condensin subunit ScpA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT9_KORVE rbh
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
condensin subunit ScpA
13_1_20cm_2_scaffold_2439_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2751..3488
DNA (738bp) protein (246aa)
Condensin subunit ScpB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT8_KORVE
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
condensin subunit ScpB
13_1_20cm_2_scaffold_2439_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3534..4265
DNA (732bp) protein (244aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kor
Pseudouridine synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT7_KORVE rbh
pseudouridine synthase
13_1_20cm_2_scaffold_2439_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4340..5467
DNA (1128bp) protein (376aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
Histidinol-phosphate aminotransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT6_KORVE rbh
aminotransferase
13_1_20cm_2_scaffold_2439_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5516..6538)
DNA (1023bp) protein (341aa)
Glucokinase {ECO:0000313|EMBL:ABF42865.1}; EC=2.7.1.2 {ECO:0000313|EMBL:ABF42865.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" sourc
Glucokinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT5_KORVE rbh
glucokinase
13_1_20cm_2_scaffold_2439_8
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6659..7603)
DNA (945bp) protein (315aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054
Formamidopyrimidine-DNA glycosylase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NTB0_GRAMM
formamidopyrimidine-DNA glycosylase
13_1_20cm_2_scaffold_2439_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7930..9279
DNA (1350bp) protein (450aa)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00
Adenylosuccinate synthetase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=PURA_KORVE rbh
adenylosuccinate synthetase
13_1_20cm_2_scaffold_2439_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9295..9582
DNA (288bp) protein (96aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJT1_KORVE
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ABF42869.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
antibiotic biosynthesis monooxygenase
13_1_20cm_2_scaffold_2439_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(9661..9852)
DNA (192bp) protein (64aa)
4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
4-oxalocrotonate tautomerase family enzyme n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJS8_KORVE
4-oxalocrotonate tautomerase
13_1_20cm_2_scaffold_2439_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10011..10436)
DNA (426bp) protein (142aa)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=NDK_KORVE
nucleoside diphosphate kinase
13_1_20cm_2_scaffold_2439_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10568..11446)
DNA (879bp) protein (293aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJS6_KORVE rbh
succinyl-CoA synthetase subunit alpha
13_1_20cm_2_scaffold_2439_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11556..12731)
DNA (1176bp) protein (392aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=SUCC_KORVE rbh
sucC; succinyl-CoA synthetase subunit beta
13_1_20cm_2_scaffold_2439_15
unknown

Not on your lists

12908..13231
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_2_scaffold_2439_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13206..13454)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RMM8_ALLVD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein
13_1_20cm_2_scaffold_2439_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13819..14961
DNA (1143bp) protein (381aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028B3_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ82644.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
13_1_20cm_2_scaffold_2439_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

14977..16140
DNA (1164bp) protein (388aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028B2_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ82645.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
13_1_20cm_2_scaffold_2439_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

16196..17617
DNA (1422bp) protein (474aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028B1_SOLUE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABJ82646.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source
RND family efflux transporter MFP subunit
13_1_20cm_2_scaffold_2439_20
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

17614..18324
DNA (711bp) protein (237aa)
ybbA; ABC transporter ATPase (EC:3.6.3.-); K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_Zixibacteria_48_11_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003601478
ABC transporter-like protein
13_1_20cm_2_scaffold_2439_21
unknown

Not on your lists

comp(18470..19003)
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_20cm_2_scaffold_2439_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19419..19949
DNA (531bp) protein (177aa)
Transcriptional regulator, MarR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMD9_KORVE
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABF41961.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
MarR family transcriptional regulator
13_1_20cm_2_scaffold_2439_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19936..20751
DNA (816bp) protein (272aa)
Methyltransferase type 11 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IME0_KORVE rbh
Methyltransferase type 11 {ECO:0000313|EMBL:ABF41960.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (str
type 11 methyltransferase
13_1_20cm_2_scaffold_2439_24
unknown

Not on your lists

21052..21306
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_2_scaffold_2439_25
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21715..22551
DNA (837bp) protein (279aa)
Outer membrane transport energization protein TonB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE7_KORVE
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:ABF39153.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="K
TonB-like protein
13_1_20cm_2_scaffold_2439_26
unknown

Not on your lists

comp(22418..22924)
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_20cm_2_scaffold_2439_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22985..25009
DNA (2025bp) protein (675aa)
DNA mismatch repair protein MutL n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MUTL_KORVE rbh
DNA mismatch repair protein MutL {ECO:0000255|HAMAP-Rule:MF_00149}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter vers
DNA mismatch repair protein MutL
13_1_20cm_2_scaffold_2439_28
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

25245..26162
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILM9_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF42221.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_2_scaffold_2439_29
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

26246..26602
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000361AA63
hypothetical protein Tax=CG_Proteo_01
hypothetical protein
13_1_20cm_2_scaffold_2439_30
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

26599..27231
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000361AA63
hypothetical protein Tax=CG_Proteo_01
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy